RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1093008", tax_kingdom = "Metazoa" and tax_phylum = "Hemichordata"

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tax_superkingdom 1

tax_phylum 1

  • Hemichordata · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1093008 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27952055 27952055 PRJNA1093008_S_NODE_40565_length_312_cov_1.610879_g40238_i0 PRJNA1093008 40565 312 1.610879 5.02594248 Saccoglossus kowalevskii 10224 Hemichordata other_Eukaryota 76.6 1.07e-13   NR XP_006826086.1 10224 g40238 i0 39 0.961538461538462 100 61 96.2 0 302 3 1003 1102 XP_006826086.1 PREDICTED: uncharacterized protein LOC102808992 [Saccoglossus kowalevskii] diamond 300 76.6 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Harrimaniidae Saccoglossus Saccoglossus kowalevskii
31110053 31110053 PRJNA1093008_S_NODE_48675_length_296_cov_2.286996_g48348_i0 PRJNA1093008 48675 296 2.286996 6.76950816 Ptychodera flava 63121 Hemichordata other_Eukaryota 51.2 6.13e-5   NR XP_070577734.1 63121 g48348 i0 45.8 1.39864864864865 48 26 48.6 0 227 84 112 159 XP_070577734.1 uncharacterized protein [Ptychodera flava] diamond 414 51.2 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;