RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA1093008", tax_clade = "Opisthokonta" and tax_phylum = "Annelida"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Annelida · 7 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 7 ✖

bioproject 1

  • PRJNA1093008 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5301451 5301451 PRJNA1093008_S_NODE_46665_length_300_cov_1.356828_g46338_i0 PRJNA1093008 46665 300 1.356828 4.070484 Hirudo verbana 311461 Annelida Annelida 56.5 0.002   NTclustered gi|2918369614|emb|OZ237780.1| 311461 g46338 i0 100 0.1 30 0 10 0 19 48 2145600 2145629 Hirudo verbana genome assembly, chromosome: 2 blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
19324289 19324289 PRJNA1093008_S_NODE_38636_length_316_cov_2.353909_g38309_i0 PRJNA1093008 38636 316 2.353909 7.43835244 Hirudo verbana 311461 Annelida Annelida 54.7 0.008   NTclustered gi|2918369706|emb|OZ237788.1| 311461 g38309 i0 100 0.0917721518987342 29 0 9 0 143 171 10489307 10489335 Hirudo verbana genome assembly, chromosome: 10 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
27121859 27121859 PRJNA1093008_S_NODE_88242_length_246_cov_1.543353_g87915_i0 PRJNA1093008 88242 246 1.543353 3.79664838 root 1 Root_unresolved Root_unresolved 46.6 0.00141   NR KAK2189669.1 27915 g87915 i0 37.5 2.15853658536585 80 41 97.6 2 3 242 34 104 KAK2189669.1 hypothetical protein NP493_100g06009 [Ridgeia piscesae] diamond 531 47 0.991489361702128 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Ridgeia Ridgeia piscesae
30036047 30036047 PRJNA1093008_S_NODE_65211_length_271_cov_1.308081_g64884_i0 PRJNA1093008 65211 271 1.308081 3.54489951 Lamellibrachia satsuma 104711 Annelida Annelida 54.3 3.3e-6   NR KAI0241600.1 104711 g64884 i0 48.2 0.619926199261993 56 29 62 0 104 271 58 113 KAI0241600.1 hypothetical protein LSAT2_023486, partial [Lamellibrachia satsuma] diamond 168 54.3 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Lamellibrachia Lamellibrachia satsuma
30478444 30478444 PRJNA1093008_S_NODE_59673_length_279_cov_0.966019_g59346_i0 PRJNA1093008 59673 279 0.966019 2.69519301 Ridgeia piscesae 27915 Annelida Annelida 43.9 0.0214   NR KAK2171267.1 27915 g59346 i0 52.9 0.365591397849462 34 16 36.6 0 239 138 383 416 KAK2171267.1 hypothetical protein NP493_1083g00012 [Ridgeia piscesae] diamond 102 43.9 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Ridgeia Ridgeia piscesae
30636104 30636104 PRJNA1093008_S_NODE_76753_length_256_cov_1.699454_g76426_i0 PRJNA1093008 76753 256 1.699454 4.35060224 Helobdella robusta 6412 Annelida Annelida 42.7 0.0298   NR XP_009013375.1 6412 g76426 i0 43.5 0.5390625 46 22 53.9 1 169 32 21 62 XP_009013375.1 hypothetical protein HELRODRAFT_169288 [Helobdella robusta] diamond 138 42.7 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
32817230 32817230 PRJNA1093008_S_NODE_44060_length_305_cov_1.155172_g43733_i0 PRJNA1093008 44060 305 1.155172 3.5232746 Ridgeia piscesae 27915 Annelida Annelida 43.9 0.029   NR KAK2185771.1 27915 g43733 i0 59.3 0.265573770491803 27 11 26.6 0 304 224 307 333 KAK2185771.1 hypothetical protein NP493_224g01011 [Ridgeia piscesae] diamond 81 43.9 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Ridgeia Ridgeia piscesae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;