RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1093008", tax_clade = "Discoba" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 2 ✖

tax_clade 1

  • Discoba · 2 ✖

bioproject 1

  • PRJNA1093008 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27185252 27185252 PRJNA1093008_S_NODE_49362_length_295_cov_1.734234_g49035_i0 PRJNA1093008 49362 295 1.734234 5.1159903 Leishmania 5658 Euglenozoa other_Eukaryota 43.5 0.0352   NR CAB46680.1 5664 g49035 i0 38.5 1.32203389830508 65 39 65.1 1 247 56 316 380 CAB46680.1 proteophosphoglycan, partial [Leishmania major] diamond 390 43.5 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania major
27794285 27794285 PRJNA1093008_S_NODE_50244_length_293_cov_3.822727_g49917_i0 PRJNA1093008 50244 293 3.822727 11.20059011 Leishmania martiniquensis 1580590 Euglenozoa other_Eukaryota 43.5 0.0371   NR XP_067176162.1 1580590 g49917 i0 31.7 0.839590443686007 82 51 84 1 268 23 319 395 XP_067176162.1 hypothetical protein LSCM1_02018 [Leishmania martiniquensis] diamond 246 43.5 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania martiniquensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;