RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1093008" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA1093008 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26878016 26878016 PRJNA1093008_S_NODE_70481_length_264_cov_1.434555_g70154_i0 PRJNA1093008 70481 264 1.434555 3.7872252 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 42.4 0.0273   NR GIW45532.1 2838779 g70154 i0 44.2 0.590909090909091 52 25 59.1 1 199 44 8 55 GIW45532.1 MAG: hypothetical protein KatS3mg077_2814 [Candidatus Binatia bacterium] diamond 156 42.4 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
29152177 29152177 PRJNA1093008_S_NODE_27309_length_346_cov_1.652015_g26982_i0 PRJNA1093008 27309 346 1.652015 5.7159719 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 47.4 0.00279   NR HKD70440.1 2785449 g26982 i0 35.6 0.632947976878613 73 42 59 2 258 55 48 120 HKD70440.1 GMC family oxidoreductase [Candidatus Binataceae bacterium] diamond 219 47.4 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
30984037 30984037 PRJNA1093008_S_NODE_85114_length_248_cov_2.640000_g84787_i0 PRJNA1093008 85114 248 2.64 6.5472 Patescibacteria group bacterium 2052139 Bacteria Bacteria 40.8 0.0434   NR MDQ5972060.1 2052139 g84787 i0 27 0.762096774193548 63 34 61.7 1 180 28 17 79 MDQ5972060.1 hypothetical protein [Patescibacteria group bacterium] diamond 189 40.8 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;