RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1092581" and tax_phylum = "Synergistota"

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tax_superkingdom 1

tax_phylum 1

  • Synergistota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1092581 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18047593 18047593 PRJNA1092581_P_NODE_117215_length_228_cov_3.503226_g116682_i0 PRJNA1092581 117215 228 3.503226 7.98735528 uncultured Fretibacterium sp. 1678694 Bacteria Bacteria 134 6.13e-36   NR WP_299299205.1 1678694 g116682 i0 95.5 1.73684210526316 66 3 86.8 0 21 218 249 314 WP_299299205.1 glycosyltransferase [uncultured Fretibacterium sp.] diamond 396 134 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Aminobacteriaceae Fretibacterium uncultured Fretibacterium sp.
26750650 26750650 PRJNA1092581_P_NODE_114341_length_233_cov_2.618750_g113808_i0 PRJNA1092581 114341 233 2.61875 6.1016875 uncultured Fretibacterium sp. 1678694 Bacteria Bacteria 62 5e-9   NR WP_299075964.1 1678694 g113808 i0 71.4 0.540772532188841 42 12 54.1 0 214 89 345 386 WP_299075964.1 efflux RND transporter periplasmic adaptor subunit [uncultured Fretibacterium sp.] diamond 126 62 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Aminobacteriaceae Fretibacterium uncultured Fretibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;