RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1092581", tax_phylum = "Negarnaviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

  • Negarnaviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1092581 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11221919 11221919 PRJNA1092581_P_NODE_61469_length_338_cov_1.173585_g60936_i0 PRJNA1092581 61469 338 1.173585 3.9667173 Orthorubulavirus 2560195 Viruses Viruses 619 6.969999999999999e-173   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g60936 i0 99.704 79.4437869822485 338 1 100 0 1 338 386 49 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 26852 619 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
29522018 29522018 PRJNA1092581_P_NODE_71370_length_309_cov_5.601695_g70837_i0 PRJNA1092581 71370 309 5.601695 17.30923755 Chuvivirus 2842604 Viruses Viruses 125 2.72e-31   NR WET19887.1 2842604 g70837 i0 60 3.70873786407767 95 38 92.2 0 24 308 308 402 WET19887.1 MAG: nucleoprotein [Freshwater turtle neural virus 1] diamond 1146 125 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Chuvivirus Chuvivirus
31869148 31869148 PRJNA1092581_P_NODE_37657_length_447_cov_4.395722_g37125_i0 PRJNA1092581 37657 447 4.395722 19.64887734 African cichlid piscichuvirus 3065075 Viruses Viruses 99.8 4.78e-21   NR WLN26256.1 3065075 g37125 i0 49 0.671140939597315 100 51 67.1 0 444 145 135 234 WLN26256.1 MAG: L protein, partial [African cichlid piscichuvirus] diamond 300 99.8 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus African cichlid piscichuvirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;