RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1092581", tax_kingdom = "Loebvirae" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 3 ✖

bioproject 1

  • PRJNA1092581 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23970798 23970798 PRJNA1092581_P_NODE_55379_length_358_cov_18.522807_g54846_i0 PRJNA1092581 55379 358 18.522807 66.31164906 root 1 Root_unresolved Root_unresolved 582 9.719999999999996e-162   NTclustered gi|14974|emb|V00606.1| 10863 g54846 i0 99.377 88.6815642458101 321 2 90 0 21 341 2770 3090 Genome of bacteriophage f1 (closely related to phages fd and m13) blastn 31748 582 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae Inovirus Inovirus M13
24423506 24423506 PRJNA1092581_P_NODE_69720_length_313_cov_18.937500_g69187_i0 PRJNA1092581 69720 313 18.9375 59.274375 Inoviridae sp. 2219103 Viruses Viruses 499 8.7e-137   NTclustered gi|2059617279|tpg|BK037425.1| 2219103 g69187 i0 99.634 26.7507987220447 273 1 87 0 21 293 6689 6417 MAG TPA_asm: Inoviridae sp. isolate cta6A2, partial genome blastn 8373 499 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
26718991 26718991 PRJNA1092581_P_NODE_124441_length_208_cov_13.844444_g123908_i0 PRJNA1092581 124441 208 13.844444 28.79644352 Inoviridae sp. 2219103 Viruses Viruses 94 1.4499999999999998e-23   NR XOF04448.1 2219103 g123908 i0 65 1.73076923076923 60 21 86.5 0 186 7 1 60 XOF04448.1 MAG: hypothetical protein [Inoviridae sp.] diamond 360 94 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;