RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1092581", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 4 ✖

tax_kingdom 1

  • Fungi · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1092581 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6575650 6575650 PRJNA1092581_P_NODE_76346_length_297_cov_4.044643_g75813_i0 PRJNA1092581 76346 297 4.044643 12.01258971 Allomyces arbusculus 64504 Fungi Fungi 57.8 2.53e-7   NR KAJ3374634.1 64504 g75813 i0 51.7 0.585858585858586 58 27 58.6 1 293 120 40 96 KAJ3374634.1 hypothetical protein GGF31_006531 [Allomyces arbusculus] diamond 174 57.8 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces arbusculus
16774271 16774271 PRJNA1092581_P_NODE_52134_length_371_cov_4.617450_g51601_i0 PRJNA1092581 52134 371 4.61745 17.1307395 Eukaryota 2759 Fungi Fungi 154 5.1e-46   NR KNE59758.1 578462 g51601 i0 78 3.67924528301887 91 20 73.6 0 69 341 1 91 KNE59758.1 60S ribosomal protein L37a [Allomyces macrogynus ATCC 38327] diamond 1365 155 0.993548387096774 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus
28583628 28583628 PRJNA1092581_P_NODE_60307_length_341_cov_4.869403_g59774_i0 PRJNA1092581 60307 341 4.869403 16.60466423 Blastocladiella emersonii ATCC 22665 1313167 Fungi Fungi 125 7.329999999999999e-31   NR KAI9183943.1 1313167 g59774 i0 71.1 1.66275659824047 97 27 85.3 1 341 51 445 540 KAI9183943.1 ribosome-binding protein [Blastocladiella emersonii ATCC 22665] diamond 567 125 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
28669696 28669696 PRJNA1092581_P_NODE_109807_length_240_cov_7.077844_g109274_i0 PRJNA1092581 109807 240 7.077844 16.9868256 Eukaryota 2759 Fungi Fungi 75.1 9.85e-14   NR ORZ31665.1 765915 g109274 i0 54.8 5.4375 62 28 77.5 0 42 227 94 155 ORZ31665.1 Adenylosuccinate synthetase, partial [Catenaria anguillulae PL171] diamond 1305 75.5 0.994701986754967 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;