RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1092581", tax_kingdom = "Bacillati" and tax_phylum = "Vulcanimicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 3 ✖

tax_kingdom 1

  • Bacillati · 3 ✖

bioproject 1

  • PRJNA1092581 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7850811 7850811 PRJNA1092581_P_NODE_9027_length_890_cov_9.237454_g8613_i0 PRJNA1092581 9027 890 9.237454 82.2133406 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 1249 0   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g8613 i0 92.378 443.231460674157 879 63 98 4 1 876 5032047 5032924 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 394476 1249 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
11675404 11675404 PRJNA1092581_P_NODE_36610_length_454_cov_9.351706_g36078_i0 PRJNA1092581 36610 454 9.351706 42.45674524 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 566 1.27e-156   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g36078 i0 90.654 409.36563876652 428 36 95 3 8 434 5033154 5032730 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 185852 566 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
29025803 29025803 PRJNA1092581_P_NODE_107628_length_243_cov_2.700000_g107095_i0 PRJNA1092581 107628 243 2.7 6.561 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 82.4 2.77e-16   NR MFN8610487.1 3107663 g107095 i0 47.2 1.77777777777778 72 38 88.9 0 22 237 22 93 MFN8610487.1 YkgJ family cysteine cluster protein [Vulcanimicrobiota bacterium] diamond 432 82.4 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;