RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1092581", tax_kingdom = "Bacillati" and tax_phylum = "Candidatus Dormiibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Dormiibacterota · 1 ✖

tax_kingdom 1

  • Bacillati · 1 ✖

bioproject 1

  • PRJNA1092581 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31489897 31489897 PRJNA1092581_P_NODE_118376_length_226_cov_4.026144_g117843_i0 PRJNA1092581 118376 226 4.026144 9.09908544 Candidatus Aeolococcus gillhamiae 3127015 Bacteria Bacteria 94.7 1.4e-20   NR WP_337314142.1 3127015 g117843 i0 68.5 0.969026548672566 73 23 96.9 0 8 226 238 310 WP_337314142.1 murein biosynthesis integral membrane protein MurJ [Candidatus Aeolococcus gillhamiae] diamond 219 94.7 1 Bacteria   Bacillati Candidatus Dormiibacterota Candidatus Dormibacteria Candidatus Aeolococcales Candidatus Aeolococcaceae Candidatus Aeolococcus Candidatus Aeolococcus gillhamiae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;