RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1092581", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA1092581 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29341328 29341328 PRJNA1092581_P_NODE_100389_length_252_cov_3.776536_g99856_i0 PRJNA1092581 100389 252 3.776536 9.51687072 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 62.8 1.41e-9   NR MBF0570406.1 2035772 g99856 i0 53.8 0.619047619047619 52 24 61.9 0 158 3 11 62 MBF0570406.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 156 62.8 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32470625 32470625 PRJNA1092581_P_NODE_56099_length_356_cov_2.300353_g55566_i0 PRJNA1092581 56099 356 2.300353 8.18925668 Omnitrophica bacterium GWA2_52_8 1801817 Bacteria Bacteria 123 5.8399999999999995e-30   NR OGW79308.1 1801817 g55566 i0 59.4 0.893258426966292 106 42 89.3 1 323 6 410 514 OGW79308.1 MAG: hypothetical protein A2Z83_09165 [Omnitrophica bacterium GWA2_52_8] diamond 318 123 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Omnitrophica bacterium GWA2_52_8

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;