RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA1092581" and tax_clade = "Metamonada"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Metamonada · 7 ✖

bioproject 1

  • PRJNA1092581 · 7 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26774252 26774252 PRJNA1092581_P_NODE_61701_length_337_cov_3.090909_g61168_i0 PRJNA1092581 61701 337 3.090909 10.41636333 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 61.6 2.69e-8   NR CAK8761882.1 28002 g61168 i0 50 3.61424332344214 58 29 51.6 0 330 157 783 840 CAK8761882.1 HINF_004284 [Hexamita inflata] diamond 1218 61.6 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
26782919 26782919 PRJNA1092581_P_NODE_46181_length_398_cov_3.406154_g45648_i0 PRJNA1092581 46181 398 3.406154 13.55649292 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 48.5 9.93e-4   NR XP_068354741.1 1144522 g45648 i0 41.7 0.542713567839196 72 40 53.5 2 6 218 64 134 XP_068354741.1 Ras-related protein Rab-6A [Tritrichomonas foetus] diamond 216 48.5 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
27067481 27067481 PRJNA1092581_P_NODE_21922_length_594_cov_5.216891_g21400_i0 PRJNA1092581 21922 594 5.216891 30.98833254 Streblomastix strix 222440 Preaxostyla other_Eukaryota 168 2e-49   NR KAA6388004.1 222440 g21400 i0 50 2.61111111111111 172 80 86.4 4 539 27 1 167 KAA6388004.1 MAG: putative Translationally-controlled tumor protein [Streblomastix strix] diamond 1551 168 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
27447045 27447045 PRJNA1092581_P_NODE_121883_length_216_cov_6.475524_g121350_i0 PRJNA1092581 121883 216 6.475524 13.98713184 Giardia lamblia P15 658858 Fornicata other_Eukaryota 42 0.0495   NR EFO65611.1 658858 g121350 i0 38.7 0.861111111111111 62 35 86.1 1 193 8 229 287 EFO65611.1 Hypothetical protein GLP15_1712 [Giardia lamblia P15] diamond 186 42 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
27604851 27604851 PRJNA1092581_P_NODE_56104_length_356_cov_2.215548_g55571_i0 PRJNA1092581 56104 356 2.215548 7.88735088 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 66.2 1.83e-10   NR XP_067772100.1 135588 g55571 i0 48.7 0.657303370786517 78 30 65.7 1 120 353 8 75 XP_067772100.1 small GTP-binding protein [Histomonas meleagridis] diamond 234 66.2 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
28772826 28772826 PRJNA1092581_P_NODE_67087_length_321_cov_1.387097_g66554_i0 PRJNA1092581 67087 321 1.387097 4.45258137 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 137 1.01e-35   NR KAJ3446780.1 1746091 g66554 i0 56.1 0.91588785046729 98 43 91.6 0 24 317 159 256 KAJ3446780.1 glucosylceramidase [Anaeramoeba flamelloides] diamond 294 137 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
28804236 28804236 PRJNA1092581_P_NODE_126708_length_201_cov_11.187500_g126175_i0 PRJNA1092581 126708 201 11.1875 22.486875 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 66.2 2.79e-11   NR KAJ5073093.1 1746090 g126175 i0 63.3 0.73134328358209 49 18 73.1 0 14 160 156 204 KAJ5073093.1 ribosomal protein L15 [Anaeramoeba ignava] diamond 147 66.2 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;