RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1092581", tax_clade = "Haptista" and tax_superkingdom = "Eukaryota"

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analysis 2

tax_superkingdom 1

  • Eukaryota · 3 ✖

tax_phylum 1

tax_clade 1

  • Haptista · 3 ✖

bioproject 1

  • PRJNA1092581 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13771480 13771480 PRJNA1092581_P_NODE_27551_length_529_cov_156.289474_g27019_i0 PRJNA1092581 27551 529 156.289474 826.77131746 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 213 6.46e-68   NR KAL1515397.1 97485 g27019 i0 71 5.55765595463138 138 40 78.3 0 474 61 3 140 KAL1515397.1 hypothetical protein AB1Y20_002025 [Prymnesium parvum] diamond 2940 215 0.990697674418605 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium parvum
16773096 16773096 PRJNA1092581_P_NODE_125874_length_204_cov_5.251908_g125341_i0 PRJNA1092581 125874 204 5.251908 10.71389232 Phaeocystis globosa 33658 Haptophyta other_Eukaryota 87.9 4.88e-13   NTclustered gi|1433046501|gb|MH657229.1| 33658 g125341 i0 84.375 14.7892156862745 96 8 44 6 21 110 41 135 Phaeocystis globosa strain PGBBW1 large subunit ribosomal RNA gene, partial sequence blastn 3017 87.9 1 Eukaryota Haptista   Haptophyta   Phaeocystales Phaeocystaceae Phaeocystis Phaeocystis globosa
31512856 31512856 PRJNA1092581_P_NODE_123456_length_211_cov_8.956522_g122923_i0 PRJNA1092581 123456 211 8.956522 18.89826142 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 67.8 1.72e-11   NR KAL1528518.1 97485 g122923 i0 60.9 4.18009478672986 46 18 65.4 0 23 160 210 255 KAL1528518.1 hypothetical protein AB1Y20_009861 [Prymnesium parvum] diamond 882 67.8 1 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium parvum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;