RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1092581", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Nomuraibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Nomuraibacteriota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA1092581 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12950536 12950536 PRJNA1092581_P_NODE_39171_length_437_cov_5.846154_g38638_i0 PRJNA1092581 39171 437 5.846154 25.54769298 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 477 5.879999999999999e-130   NTclustered gi|2258874150|gb|CP060230.1| 2052152 g38638 i0 88.119 387.720823798627 404 45 92 3 16 417 383419 383821 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-34 chromosome blastn 169434 477 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
16774177 16774177 PRJNA1092581_P_NODE_4874_length_1125_cov_15.014259_g4597_i0 PRJNA1092581 4874 1125 15.014259 168.91041375 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 813 0   NTclustered gi|1958028780|gb|CP064973.1| 2052152 g4597 i0 82.788 192.424888888889 947 128 83 33 43 972 126700 125772 MAG: Candidatus Nomurabacteria bacterium isolate EsbW_18-Q3-R4-48_MAXAC.200_cln chromosome, complete genome blastn 216478 813 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
23147954 23147954 PRJNA1092581_P_NODE_111399_length_237_cov_118.835366_g110866_i0 PRJNA1092581 111399 237 118.835366 281.63981742 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 300 6.88e-77   NTclustered gi|2258875662|gb|CP060232.1| 2052152 g110866 i0 91.667 29.7974683544304 216 18 91 0 22 237 964849 964634 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-40 chromosome, complete genome blastn 7062 300 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;