RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1092581", tax_clade = "Apusozoa" and tax_superkingdom = "Eukaryota"

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analysis 2

tax_superkingdom 1

  • Eukaryota · 3 ✖

tax_clade 1

  • Apusozoa · 3 ✖

bioproject 1

  • PRJNA1092581 · 3 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11221669 11221669 PRJNA1092581_P_NODE_38049_length_445_cov_2.188172_g37516_i0 PRJNA1092581 38049 445 2.188172 9.7373654 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 54.7 0.012   NTclustered gi|923129780|ref|XM_013902902.1| 461836 g37516 i0 100 0.258426966292135 29 0 7 0 38 66 604 632 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_04684), partial mRNA blastn 115 54.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29309596 29309596 PRJNA1092581_P_NODE_17289_length_668_cov_2.638655_g16779_i0 PRJNA1092581 17289 668 2.638655 17.6262154 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 99.4 6.35e-20   NR XP_013757702.1 461836 g16779 i0 31.2 1.06437125748503 237 140 98.8 9 1 660 723 953 XP_013757702.1 transcription factor protein [Thecamonas trahens ATCC 50062] diamond 711 99.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31774258 31774258 PRJNA1092581_P_NODE_91337_length_267_cov_2.835052_g90804_i0 PRJNA1092581 91337 267 2.835052 7.56958884 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 80.9 1.96e-15   NR XP_013752997.1 461836 g90804 i0 53.4 0.820224719101124 73 32 82 2 232 14 1776 1846 XP_013752997.1 ULK/ULK protein kinase [Thecamonas trahens ATCC 50062] diamond 219 80.9 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;