RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1089179" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1089179 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16771780 16771780 PRJNA1089179_P_NODE_11074_length_281_cov_1.596154_g11056_i0 PRJNA1089179 11074 281 1.596154 4.48519274 Eurotatoria 2816136 Rotifera other_Eukaryota 93.6 7.95e-20   NR CAF1443462.1 249248 g11056 i0 56.5 14.423487544484 85 37 90.7 0 12 266 234 318 CAF1443462.1 unnamed protein product [Adineta ricciae] diamond 4053 93.6 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
18046531 18046531 PRJNA1089179_P_NODE_2275_length_514_cov_1.224490_g2257_i0 PRJNA1089179 2275 514 1.22449 6.2938786 root 1 Root_unresolved Root_unresolved 129 2.1999999999999994e-32   NR CAF1640944.1 1234261 g2257 i0 80 4.5 70 14 40.9 0 1 210 200 269 CAF1640944.1 unnamed protein product, partial [Didymodactylos carnosus] diamond 2313 129 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Didymodactylos Didymodactylos carnosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;