contig_metadata
7 rows where bioproject = "PRJNA1089179", tax_phylum = "Rhodophyta" and tax_superkingdom = "Eukaryota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 194892 | 194892 | PRJNA1089179_P_NODE_9721_length_295_cov_2.418919_g9703_i0 | PRJNA1089179 | 9721 | 295 | 2.418919 | 7.13581105 | Rhodellophyceae | 661027 | Rhodophyta | other_Eukaryota | 70.1 | 1.59e-11 | NR | YP_010338689.1 | 38265 | g9703 | i0 | 41.2 | 2.97966101694915 | 97 | 29 | 98.6 | 1 | 293 | 3 | 251 | 319 | YP_010338689.1 putative reverse transcriptase/maturase [Glaucosphaera vacuolata] | diamond | 879 | 70.1 | 1 | Eukaryota | Rhodophyta | Rhodellophyceae | Glaucosphaerales | Glaucosphaeraceae | Glaucosphaera | Glaucosphaera vacuolata | |||
| 1017453 | 1017453 | PRJNA1089179_P_NODE_16301_length_244_cov_1.192982_g16283_i0 | PRJNA1089179 | 16301 | 244 | 1.192982 | 2.91087608 | Viridiplantae | 33090 | Rhodophyta | other_Eukaryota | 183 | 7.479999999999997e-42 | NTclustered | gi|24462103|gb|AF545591.1| | 130081 | g16283 | i0 | 80.769 | 29.905737704918 | 234 | 45 | 96 | 0 | 1 | 234 | 643 | 410 | Galdieria sulphuraria strain SAG 108.79 voucher SAG:108.79 elongation factor Tu (tufA) gene, partial cds; chloroplast | blastn | 7297 | 183 | 1 | Eukaryota | Rhodophyta | Bangiophyceae | Galdieriales | Galdieriaceae | Galdieria | Galdieria sulphuraria | |||
| 1469438 | 1469438 | PRJNA1089179_P_NODE_62_length_1589_cov_9.517150_g43_i1 | PRJNA1089179 | 62 | 1589 | 9.5171500000000009 | 151.2275135 | Dasyclonium flaccidum | 2007274 | Rhodophyta | other_Eukaryota | 370 | 3.97e-97 | NTclustered | gi|1203234094|gb|MF093977.1| | 2007274 | g43 | i1 | 73.876 | 37.4298300818125 | 1045 | 221 | 64 | 40 | 237 | 1252 | 174 | 1195 | Dasyclonium flaccidum isolate PD1087 cytochrome oxidase subunit 1 (cox1) gene, complete cds; mitochondrial | blastn | 59476 | 370 | 1 | Eukaryota | Rhodophyta | Florideophyceae | Ceramiales | Rhodomelaceae | Dasyclonium | Dasyclonium flaccidum | |||
| 10398123 | 10398123 | PRJNA1089179_P_NODE_49_length_1715_cov_7.073691_g43_i0 | PRJNA1089179 | 49 | 1715 | 7.073691 | 121.31380065 | Dasyclonium flaccidum | 2007274 | Rhodophyta | other_Eukaryota | 335 | 1.57e-86 | NTclustered | gi|1203234094|gb|MF093977.1| | 2007274 | g43 | i0 | 73.61 | 30.8583090379009 | 989 | 212 | 56 | 39 | 237 | 1196 | 174 | 1142 | Dasyclonium flaccidum isolate PD1087 cytochrome oxidase subunit 1 (cox1) gene, complete cds; mitochondrial | blastn | 52922 | 335 | 1 | Eukaryota | Rhodophyta | Florideophyceae | Ceramiales | Rhodomelaceae | Dasyclonium | Dasyclonium flaccidum | |||
| 27817263 | 27817263 | PRJNA1089179_P_NODE_364_length_917_cov_2.691943_g353_i0 | PRJNA1089179 | 364 | 917 | 2.691943 | 24.68511731 | root | 1 | Root_unresolved | Root_unresolved | 326 | 8.309999999999998e-103 | NR | YP_010338686.1 | 38265 | g353 | i0 | 62.6 | 1.60959651035987 | 246 | 92 | 80.5 | 0 | 883 | 146 | 224 | 469 | YP_010338686.1 putative reverse transcriptase/maturase [Glaucosphaera vacuolata] | diamond | 1476 | 326 | 1 | Eukaryota | Rhodophyta | Rhodellophyceae | Glaucosphaerales | Glaucosphaeraceae | Glaucosphaera | Glaucosphaera vacuolata | |||
| 28078156 | 28078156 | PRJNA1089179_P_NODE_4645_length_392_cov_1.742947_g4627_i0 | PRJNA1089179 | 4645 | 392 | 1.742947 | 6.83235224 | Rhodosorus marinus | 101924 | Rhodophyta | other_Eukaryota | 83.6 | 2.05e-17 | NR | KAJ8908848.1 | 101924 | g4627 | i0 | 67.3 | 0.397959183673469 | 52 | 17 | 39.8 | 0 | 5 | 160 | 87 | 138 | KAJ8908848.1 hypothetical protein NDN08_005552 [Rhodosorus marinus] | diamond | 156 | 83.6 | 1 | Eukaryota | Rhodophyta | Stylonematophyceae | Stylonematales | Stylonemataceae | Rhodosorus | Rhodosorus marinus | |||
| 28543499 | 28543499 | PRJNA1089179_P_NODE_4867_length_385_cov_1.804487_g4849_i0 | PRJNA1089179 | 4867 | 385 | 1.804487 | 6.94727495 | Viridiplantae | 33090 | Rhodophyta | other_Eukaryota | 80.1 | 7.16e-15 | NR | PXF48879.1 | 448386 | g4849 | i0 | 59.1 | 2.07272727272727 | 66 | 22 | 51.4 | 1 | 13 | 210 | 237 | 297 | PXF48879.1 Guanine nucleotide-binding protein subunit beta-2-like 1 [Gracilariopsis chorda] | diamond | 798 | 80.1 | 1 | Eukaryota | Rhodophyta | Florideophyceae | Gracilariales | Gracilariaceae | Gracilariopsis | Gracilariopsis chorda |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;