RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1089179" and tax_phylum = "Ignavibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1089179 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4021428 4021428 PRJNA1089179_P_NODE_11004_length_282_cov_1.086124_g10986_i0 PRJNA1089179 11004 282 1.086124 3.06286968 Ignavibacteria bacterium 2053306 Bacteria Bacteria 309 1.4e-79   NTclustered gi|1938788434|gb|CP054181.1| 2053306 g10986 i0 87.594 0.943262411347518 266 33 94 0 2 267 808010 808275 Ignavibacteria bacterium isolate H1_BAC2 chromosome blastn 266 309 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
27352256 27352256 PRJNA1089179_P_NODE_7483_length_328_cov_1.145098_g7465_i0 PRJNA1089179 7483 328 1.145098 3.75592144 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 54.3 8.74e-6   NR MDY0081169.1 2651163 g7465 i0 93.1 0.265243902439024 29 2 26.5 0 242 328 1 29 MDY0081169.1 AAA family ATPase [Ignavibacteriaceae bacterium] diamond 87 54.3 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium
31015390 31015390 PRJNA1089179_P_NODE_10015_length_292_cov_1.639269_g9997_i0 PRJNA1089179 10015 292 1.639269 4.78666548 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 175 4.96e-51   NR MEO8399802.1 2651163 g9997 i0 87.6 0.996575342465753 97 12 99.7 0 291 1 180 276 MEO8399802.1 DNA methyltransferase [Ignavibacteriaceae bacterium] diamond 291 175 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium
31363272 31363272 PRJNA1089179_P_NODE_16176_length_245_cov_0.883721_g16158_i0 PRJNA1089179 16176 245 0.883721 2.16511645 Ignavibacteria bacterium 2053306 Bacteria Bacteria 63.9 1.31e-9   NR HEX2787629.1 2053306 g16158 i0 58 2.4 50 21 61.2 0 1 150 721 770 HEX2787629.1 heavy metal translocating P-type ATPase metal-binding domain-containing protein [Ignavibacteria bacterium] diamond 588 63.9 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;