RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1089179" and tax_phylum = "Candidatus Electryoneota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Electryoneota · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1089179 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30762733 30762733 PRJNA1089179_P_NODE_854_length_704_cov_2.099842_g838_i0 PRJNA1089179 854 704 2.099842 14.78288768 Candidatus Electryoneaceae bacterium 3039641 Bacteria Bacteria 175 2.4699999999999997e-47   NR MDP8228267.1 3039641 g838 i0 41.2 5.68039772727273 221 123 94.2 3 2 664 133 346 MDP8228267.1 group II intron reverse transcriptase/maturase [Candidatus Electryoneaceae bacterium] diamond 3999 175 1 Bacteria FCB group Pseudomonadati Candidatus Electryoneota Candidatus Electryoneia Candidatus Electryoneales Candidatus Electryoneaceae   Candidatus Electryoneaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;