RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1089179" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1089179 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29120422 29120422 PRJNA1089179_P_NODE_15269_length_248_cov_0.880000_g15251_i0 PRJNA1089179 15269 248 0.88 2.1824 Fimbriimonas sp. 1936159 Bacteria Bacteria 70.1 9.02e-12   NR HLO97423.1 1936159 g15251 i0 91.4 0.423387096774194 35 3 42.3 0 1 105 495 529 HLO97423.1 TROVE domain-containing protein [Fimbriimonas sp.] diamond 105 70.1 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
32249230 32249230 PRJNA1089179_P_NODE_15558_length_247_cov_0.885057_g15540_i0 PRJNA1089179 15558 247 0.885057 2.18609079 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 115 5.5299999999999996e-31   NR MFM9872598.1 2682144 g15540 i0 64.5 1.87044534412955 76 27 92.3 0 238 11 1 76 MFM9872598.1 SRPBCC domain-containing protein [Fimbriimonadaceae bacterium] diamond 462 115 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;