RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1089179", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA1089179 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31711076 31711076 PRJNA1089179_P_NODE_16697_length_243_cov_0.905882_g16679_i0 PRJNA1089179 16697 243 0.905882 2.20129326 Chloroflexota bacterium 2026724 Bacteria Bacteria 135 1.86e-35   NR MBU6361466.1 2026724 g16679 i0 86.4 1 81 11 100 0 243 1 180 260 MBU6361466.1 xylulokinase [Chloroflexota bacterium] diamond 243 135 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
32722783 32722783 PRJNA1089179_P_NODE_16400_length_244_cov_0.900585_g16382_i0 PRJNA1089179 16400 244 0.900585 2.1974274 Herpetosiphonaceae bacterium 2720503 Bacteria Bacteria 120 2.36e-29   NR HEY0606556.1 2720503 g16382 i0 67.1 5.97540983606557 82 25 98.4 1 5 244 1019 1100 HEY0606556.1 amino acid adenylation domain-containing protein [Herpetosiphonaceae bacterium] diamond 1458 120 1 Bacteria   Bacillati Chloroflexota Chloroflexia Herpetosiphonales Herpetosiphonaceae   Herpetosiphonaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;