RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1089179", tax_clade = "PVC group" and tax_phylum = "Chlamydiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA1089179 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17595340 17595340 PRJNA1089179_P_NODE_18014_length_227_cov_2.571429_g17996_i0 PRJNA1089179 18014 227 2.571429 5.83714383 Chlamydiia 204429 Bacteria Bacteria 233 6.73e-57   NTclustered gi|576939296|gb|KF805948.1| 424991 g17996 i0 87.081 38.5286343612335 209 23 91 4 21 227 1676 1882 Uncultured Chlamydiaceae bacterium clone KW110713-4 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 8746 233 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae   uncultured Chlamydiaceae bacterium
27510029 27510029 PRJNA1089179_P_NODE_12443_length_268_cov_1.538462_g12425_i0 PRJNA1089179 12443 268 1.538462 4.12307816 Chlamydiota bacterium 2081524 Bacteria Bacteria 164 3.16e-48   NR NDD58986.1 2081524 g12425 i0 94.3 0.985074626865672 88 5 98.5 0 266 3 62 149 NDD58986.1 hypothetical protein [Chlamydiota bacterium] diamond 264 164 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;