RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1089179", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1089179 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26655780 26655780 PRJNA1089179_P_NODE_16441_length_244_cov_0.900585_g16423_i0 PRJNA1089179 16441 244 0.900585 2.1974274 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 99.8 3.45e-22   NR HRF28156.1 2026720 g16423 i0 64.9 0.94672131147541 77 27 94.7 0 10 240 421 497 HRF28156.1 carbohydrate binding domain-containing protein [Candidatus Saccharibacteria bacterium] diamond 231 99.8 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
29719827 29719827 PRJNA1089179_P_NODE_17330_length_241_cov_0.916667_g17312_i0 PRJNA1089179 17330 241 0.916667 2.20916747 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 123 4.869999999999999e-31   NR MFO0881946.1 2973664 g17312 i0 72.2 9.99585062240664 79 21 98.3 1 240 4 22 99 MFO0881946.1 phytoene desaturase family protein [Candidatus Saccharimonadales bacterium] diamond 2409 123 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;