RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1087264" and tax_kingdom = "Thermoproteati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermoproteati · 3 ✖

bioproject 1

  • PRJNA1087264 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29909718 29909718 PRJNA1087264_P_NODE_12751_length_177_cov_1.171875_g12669_i0 PRJNA1087264 12751 177 1.171875 2.07421875 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 49.7 5.29e-5   NR HZE77115.1 2169593 g12669 i0 44.1 2.71186440677966 59 31 100 1 177 1 5 61 HZE77115.1 kelch repeat-containing protein [Nitrososphaeraceae archaeon] diamond 480 49.7 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
31584677 31584677 PRJNA1087264_P_NODE_1356_length_575_cov_1.614068_g1280_i0 PRJNA1087264 1356 575 1.614068 9.280891 Nitrosopumilus sp. 2024843 Archaea Archaea 100 1.7100000000000003e-21   NR MDA7495390.1 2024843 g1280 i0 38.5 0.84 161 81 81.4 6 99 566 160 307 MDA7495390.1 hypothetical protein [Nitrosopumilus sp.] diamond 483 100 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
32090696 32090696 PRJNA1087264_P_NODE_4258_length_315_cov_2.447368_g4176_i0 PRJNA1087264 4258 315 2.447368 7.7092092 Nitrosopumilus sp. 2024843 Archaea Archaea 72 2.74e-12   NR MDA7495390.1 2024843 g4176 i0 34.3 0.971428571428571 102 62 92.4 2 21 311 8 109 MDA7495390.1 hypothetical protein [Nitrosopumilus sp.] diamond 306 72 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;