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contig_metadata

6 rows where bioproject = "PRJNA1087264" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA1087264 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26782865 26782865 PRJNA1087264_P_NODE_11281_length_188_cov_1.100719_g11199_i0 PRJNA1087264 11281 188 1.100719 2.06935172 Methanothrix sp. 90426 Archaea Archaea 47 5.67e-4   NR HRW83283.1 90426 g11199 i0 60.5 1.37234042553191 43 17 68.6 0 27 155 337 379 HRW83283.1 hydroxymethylglutaryl-CoA synthase [Methanothrix sp.] diamond 258 47 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
28290523 28290523 PRJNA1087264_P_NODE_20166_length_162_cov_0.902655_g20084_i0 PRJNA1087264 20166 162 0.902655 1.4623011 Halobacteriales 2235 Archaea Archaea 108 4.53e-26   NR WP_271970566.1 337243 g20084 i0 100 12.7592592592593 53 0 98.1 0 161 3 241 293 WP_271970566.1 polyphosphate kinase 1, partial [Halorubrum ezzemoulense] diamond 2067 108 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum ezzemoulense
28962536 28962536 PRJNA1087264_P_NODE_7168_length_235_cov_6.161290_g7086_i0 PRJNA1087264 7168 235 6.16129 14.4790315 Methanobacteriota archaeon 2026739 Archaea Archaea 45.4 0.0039   NR MAQ04991.1 2026739 g7086 i0 37.9 0.740425531914894 58 34 74 1 211 38 525 580 MAQ04991.1 hypothetical protein [Methanobacteriota archaeon] diamond 174 45.4 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
29932764 29932764 PRJNA1087264_P_NODE_19371_length_163_cov_0.894737_g19289_i0 PRJNA1087264 19371 163 0.894737 1.45842131 Halobacteriales 2235 Archaea Archaea 78.6 2.49e-16   NR WP_188879025.1 1193105 g19289 i0 66.7 8.92638036809816 54 18 99.4 0 1 162 138 191 WP_188879025.1 (d)CMP kinase [Halarchaeum grantii] diamond 1455 78.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halarchaeum Halarchaeum grantii
31828749 31828749 PRJNA1087264_P_NODE_18697_length_164_cov_0.886957_g18615_i0 PRJNA1087264 18697 164 0.886957 1.45460948 root 1 Root_unresolved Root_unresolved 46.2 7.62e-4   NR MCK5559401.1 1906666 g18615 i0 55 4.40853658536585 40 18 73.2 0 124 5 4 43 MCK5559401.1 chitobiase/beta-hexosaminidase C-terminal domain-containing protein [Thermoplasmata archaeon] diamond 723 46.2 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
32177180 32177180 PRJNA1087264_P_NODE_15418_length_166_cov_0.871795_g15336_i0 PRJNA1087264 15418 166 0.871795 1.4471797 Archaea 2157 Archaea Archaea 58.9 1.59e-8   NR KYK20436.1 1803817 g15336 i0 52.2 3.32530120481928 46 22 83.1 0 139 2 5 50 KYK20436.1 MAG: hypothetical protein AYK21_01300 [Thermoplasmatales archaeon SG8-52-2] diamond 552 58.9 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales     Thermoplasmatales archaeon SG8-52-2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;