RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA1087264", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 7 ✖

tax_kingdom 1

  • Fungi · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA1087264 · 7 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27469873 27469873 PRJNA1087264_P_NODE_18903_length_163_cov_1.342105_g18821_i0 PRJNA1087264 18903 163 1.342105 2.18763115 Eukaryota 2759 Fungi Fungi 52 1.95e-6   NR KAJ3368675.1 64504 g18821 i0 50 5.42944785276074 46 23 84.7 0 139 2 5 50 KAJ3368675.1 hypothetical protein GGF31_006237 [Allomyces arbusculus] diamond 885 52.4 0.99236641221374 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces arbusculus
28330731 28330731 PRJNA1087264_P_NODE_10826_length_192_cov_1.069930_g10744_i0 PRJNA1087264 10826 192 1.06993 2.0542656 Paraphysoderma sedebokerense 1500003 Fungi Fungi 62.8 1.57e-9   NR KAI9141231.1 1500003 g10744 i0 53.8 0.8125 52 24 81.3 0 2 157 260 311 KAI9141231.1 P-loop containing nucleoside triphosphate hydrolase protein [Paraphysoderma sedebokerense] diamond 156 62.8 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
30857339 30857339 PRJNA1087264_P_NODE_19154_length_163_cov_0.894737_g19072_i0 PRJNA1087264 19154 163 0.894737 1.45842131 Paraphysoderma sedebokerense 1500003 Fungi Fungi 66.6 4.77e-11   NR KAI9144141.1 1500003 g19072 i0 59.6 7.58282208588957 52 21 95.7 0 156 1 1135 1186 KAI9144141.1 armadillo-type protein [Paraphysoderma sedebokerense] diamond 1236 66.6 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
31426326 31426326 PRJNA1087264_P_NODE_7036_length_238_cov_1.619048_g6954_i0 PRJNA1087264 7036 238 1.619048 3.85333424 Blastocladiella britannica 64508 Fungi Fungi 89.4 5.6300000000000005e-21   NR KAI9221418.1 64508 g6954 i0 59.2 5.18067226890756 71 29 89.5 0 236 24 40 110 KAI9221418.1 60S ribosomal protein L30 [Blastocladiella britannica] diamond 1233 89.4 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
31616113 31616113 PRJNA1087264_P_NODE_7976_length_223_cov_1.172414_g7894_i0 PRJNA1087264 7976 223 1.172414 2.61448322 Catenaria anguillulae PL171 765915 Fungi Fungi 77.4 1.72e-14   NR ORZ36916.1 765915 g7894 i0 57.7 6.83408071748879 71 29 95.5 1 217 5 95 164 ORZ36916.1 hypothetical protein BCR44DRAFT_1431981 [Catenaria anguillulae PL171] diamond 1524 77.4 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae
32745743 32745743 PRJNA1087264_P_NODE_2480_length_425_cov_1.590426_g2399_i0 PRJNA1087264 2480 425 1.590426 6.7593105 Opisthokonta 33154 Fungi Fungi 72.4 1.15e-11   NR KAJ3359797.1 64505 g2399 i0 45.2 3.77647058823529 73 38 50.1 1 424 212 364 436 KAJ3359797.1 hypothetical protein GGF32_009032 [Allomyces javanicus] diamond 1605 72.8 0.994505494505495 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces javanicus
32777038 32777038 PRJNA1087264_P_NODE_7340_length_232_cov_3.245902_g7258_i0 PRJNA1087264 7340 232 3.245902 7.53049264 Fungi 4751 Fungi Fungi 87 7.93e-20   NR KAJ3357733.1 64505 g7258 i0 64.4 3.16810344827586 59 21 76.3 0 189 13 1 59 KAJ3357733.1 60S ribosomal protein L34 [Allomyces javanicus] diamond 735 87.8 0.990888382687927 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces javanicus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;