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contig_metadata

3 rows where bioproject = "PRJNA1087264", tax_clade = "Sar" and tax_phylum = "Foraminifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1087264 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4845519 4845519 PRJNA1087264_P_NODE_12464_length_179_cov_1.176923_g12382_i0 PRJNA1087264 12464 179 1.176923 2.10669217 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 230 6.529999999999999e-56   NTclustered gi|59859701|gb|AY764021.1| 313623 g12382 i0 89.888 40.4692737430168 178 18 99 0 1 178 236 413 Trochammina sp. isolate 4057 clone TrA1302_31 actin type 1 gene, partial cds blastn 7244 230 1 Eukaryota Sar   Foraminifera   Textulariida Trochamminidae Trochammina Trochammina sp. isolate 4057
26592461 26592461 PRJNA1087264_P_NODE_9461_length_205_cov_0.980769_g9379_i0 PRJNA1087264 9461 205 0.980769 2.01057645 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 79.3 1.13e-15   NR ETO07140.1 46433 g9379 i0 50 15.7317073170732 68 34 99.5 0 205 2 182 249 ETO07140.1 ATP-binding cassette superfamily, partial [Reticulomyxa filosa] diamond 3225 79.3 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
27162105 27162105 PRJNA1087264_P_NODE_8882_length_211_cov_1.259259_g8800_i0 PRJNA1087264 8882 211 1.259259 2.65703649 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 72.4 8.73e-13   NR ETO10269.1 46433 g8800 i0 50.7 2.01895734597156 71 34 99.5 1 210 1 701 771 ETO10269.1 hypothetical protein RFI_27108 [Reticulomyxa filosa] diamond 426 72.4 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;