RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1087264" and tax_clade = "Pithoviruses"

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tax_superkingdom 1

tax_clade 1

  • Pithoviruses · 2 ✖

bioproject 1

  • PRJNA1087264 · 2 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28393890 28393890 PRJNA1087264_P_NODE_2626_length_411_cov_1.265193_g2545_i0 PRJNA1087264 2626 411 1.265193 5.19994323 Solivirus sp. 2487772 Viruses Viruses 52.4 8.83e-5   NR AYV86093.1 2487772 g2545 i0 35.2 0.788321167883212 108 61 72.3 3 298 2 32 139 AYV86093.1 MAG: hypothetical protein Solivirus6_2 [Solivirus sp.] diamond 324 52.4 1 Viruses Pithoviruses             Solivirus sp.
28962533 28962533 PRJNA1087264_P_NODE_3508_length_350_cov_1.900332_g3426_i0 PRJNA1087264 3508 350 1.900332 6.651162 Solivirus sp. 2487772 Viruses Viruses 45.4 0.0131   NR AYV86093.1 2487772 g3426 i0 37 0.857142857142857 100 55 79.7 3 281 3 200 298 AYV86093.1 MAG: hypothetical protein Solivirus6_2 [Solivirus sp.] diamond 300 45.4 1 Viruses Pithoviruses             Solivirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;