RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1087264", tax_clade = "Metamonada" and tax_phylum = "Preaxostyla"

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tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 4 ✖

tax_clade 1

  • Metamonada · 4 ✖

bioproject 1

  • PRJNA1087264 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12947750 12947750 PRJNA1087264_P_NODE_17271_length_165_cov_0.879310_g17189_i0 PRJNA1087264 17271 165 0.87931 1.4508615 root 1 Root_unresolved Root_unresolved 81.6 1.17e-16   NR KAJ4459671.1 342808 g17189 i0 64.8 1.96363636363636 54 17 98.2 1 163 2 256 307 KAJ4459671.1 putative Cysteine proteinase 3 [Paratrimastix pyriformis] diamond 324 81.6 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
29017211 29017211 PRJNA1087264_P_NODE_2888_length_388_cov_2.362832_g2807_i0 PRJNA1087264 2888 388 2.362832 9.16778816 Oxymonadida 66288 Preaxostyla other_Eukaryota 119 2.02e-31   NR KAA6388004.1 222440 g2807 i0 54.8 2.43556701030928 104 46 80.4 1 375 64 64 166 KAA6388004.1 MAG: putative Translationally-controlled tumor protein [Streblomastix strix] diamond 945 119 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
29878094 29878094 PRJNA1087264_P_NODE_20611_length_162_cov_0.902655_g20529_i0 PRJNA1087264 20611 162 0.902655 1.4623011 Blattamonas nauphoetae 2049346 Preaxostyla other_Eukaryota 82.4 1.07e-16   NR KAK2959373.1 2049346 g20529 i0 70.4 2 54 16 100 0 162 1 261 314 KAK2959373.1 putative Bifunctional polynucleotide phosphatase/kinase [Blattamonas nauphoetae] diamond 324 82.4 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida   Blattamonas Blattamonas nauphoetae
30193796 30193796 PRJNA1087264_P_NODE_8772_length_213_cov_0.932927_g8690_i0 PRJNA1087264 8772 213 0.932927 1.98713451 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 99.4 2.97e-22   NR KAJ4461358.1 342808 g8690 i0 65.7 0.985915492957746 70 24 98.6 0 3 212 5725 5794 KAJ4461358.1 putative NAD-dependent epimerase/dehydratase family protein [Paratrimastix pyriformis] diamond 210 99.4 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;