RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1087264", tax_clade = "Metamonada" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 3 ✖

tax_clade 1

  • Metamonada · 3 ✖

bioproject 1

  • PRJNA1087264 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27257149 27257149 PRJNA1087264_P_NODE_7223_length_235_cov_0.978495_g7141_i0 PRJNA1087264 7223 235 0.978495 2.29946325 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 124 1.45e-32   NR KAG9392263.1 201153 g7141 i0 66.7 18.6893617021277 78 26 99.6 0 2 235 107 184 KAG9392263.1 hypothetical protein J8273_5248 [Carpediemonas membranifera] diamond 4392 124 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
27667919 27667919 PRJNA1087264_P_NODE_14104_length_167_cov_1.296610_g14022_i0 PRJNA1087264 14104 167 1.29661 2.1653387 Giardia muris 5742 Fornicata other_Eukaryota 62 8.62e-11   NR TNJ30202.1 5742 g14022 i0 53.1 1.67065868263473 49 23 88 0 158 12 6 54 TNJ30202.1 Ribosomal protein S21 [Giardia muris] diamond 279 62 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia muris
30067445 30067445 PRJNA1087264_P_NODE_18432_length_164_cov_0.886957_g18350_i0 PRJNA1087264 18432 164 0.886957 1.45460948 Hexamita inflata 28002 Fornicata other_Eukaryota 49.3 6.13e-5   NR CAK8773861.1 28002 g18350 i0 49.1 0.969512195121951 53 26 95.1 1 2 157 224 276 CAK8773861.1 HINF_055388 [Hexamita inflata] diamond 159 49.3 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;