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contig_metadata

14 rows where bioproject = "PRJNA1087264", tax_clade = "Amoebozoa" and tax_phylum = "Discosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Discosea · 14 ✖

tax_clade 1

  • Amoebozoa · 14 ✖

bioproject 1

  • PRJNA1087264 · 14 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2744779 2744779 PRJNA1087264_P_NODE_4623_length_301_cov_1.373016_g4541_i0 PRJNA1087264 4623 301 1.373016 4.13277816 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 169 2.29e-49   NR XP_004352945.1 1257118 g4541 i0 80.8 0.98671096345515 99 19 98.7 0 3 299 48 146 XP_004352945.1 UDPglucuronate decarboxylase, putative [Acanthamoeba castellanii str. Neff] diamond 297 169 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
10397321 10397321 PRJNA1087264_P_NODE_11829_length_183_cov_1.641791_g11747_i0 PRJNA1087264 11829 183 1.641791 3.00447753 Vannella sp. BEN3V 1215631 Discosea other_Eukaryota 259 8.56e-65   NTclustered gi|399764216|gb|JQ271727.1| 1215631 g11747 i0 92.473 100.666666666667 186 7 100 5 1 183 626 807 Vannella sp. BEN3V 18S ribosomal RNA gene, partial sequence blastn 18422 259 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. BEN3V
12947787 12947787 PRJNA1087264_P_NODE_371_length_1032_cov_2.307223_g321_i0 PRJNA1087264 371 1032 2.307223 23.81054136 Ripella sp. 805 1217113 Discosea other_Eukaryota 837 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g321 i0 94.679 52.9147286821705 545 19 53 8 1 542 538 1 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 54608 837 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
13770797 13770797 PRJNA1087264_P_NODE_3491_length_351_cov_2.298013_g3409_i0 PRJNA1087264 3491 351 2.298013 8.06602563 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 278 5.03e-70   NTclustered gi|53829569|gb|AY582837.1| 43142 g3409 i0 80.966 83.0740740740741 352 65 100 2 1 351 574 924 Acanthamoeba culbertsoni HSP70 gene, partial cds blastn 29159 278 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba culbertsoni
14222745 14222745 PRJNA1087264_P_NODE_1812_length_500_cov_1.432373_g1732_i0 PRJNA1087264 1812 500 1.432373 7.161865 Cochliopodium minus 313997 Discosea other_Eukaryota 649 0   NTclustered gi|330902862|gb|JF298257.1| 313997 g1732 i0 91.649 46.942 479 23 100 12 1 468 625 153 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 23471 649 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
26624293 26624293 PRJNA1087264_P_NODE_4761_length_296_cov_1.712551_g4679_i0 PRJNA1087264 4761 296 1.712551 5.06915096 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 68.6 1.73e-12   NR XP_004333362.1 1257118 g4679 i0 52.7 1.48986486486486 74 35 75 0 295 74 35 108 XP_004333362.1 ribosomal protein L21e, putative [Acanthamoeba castellanii str. Neff] diamond 441 68.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26814457 26814457 PRJNA1087264_P_NODE_19801_length_163_cov_0.894737_g19719_i0 PRJNA1087264 19801 163 0.894737 1.45842131 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 46.6 5.58e-4   NR XP_004341866.1 1257118 g19719 i0 46.9 0.901840490797546 49 25 90.2 1 2 148 168 215 XP_004341866.1 transmembrane 9 superfamily protein member 4, putative [Acanthamoeba castellanii str. Neff] diamond 147 46.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28172860 28172860 PRJNA1087264_P_NODE_16306_length_166_cov_0.871795_g16224_i0 PRJNA1087264 16306 166 0.871795 1.4471797 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 63.9 4.42e-10   NR XP_004344035.1 1257118 g16224 i0 53.7 0.975903614457831 54 25 97.6 0 166 5 491 544 XP_004344035.1 TNF receptor-associated protein 1, putative [Acanthamoeba castellanii str. Neff] diamond 162 63.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29814712 29814712 PRJNA1087264_P_NODE_13671_length_170_cov_1.264463_g13589_i0 PRJNA1087264 13671 170 1.264463 2.1495871 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 99.4 6.53e-23   NR XP_004341541.1 1257118 g13589 i0 82.1 0.988235294117647 56 10 98.8 0 2 169 307 362 XP_004341541.1 GTP binding protein [Acanthamoeba castellanii str. Neff] diamond 168 99.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30098969 30098969 PRJNA1087264_P_NODE_1472_length_554_cov_1.124752_g1395_i0 PRJNA1087264 1472 554 1.124752 6.23112608 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 72 1.87e-12   NR XP_004349605.1 1257118 g1395 i0 46 0.471119133574007 87 44 46 2 469 215 49 134 XP_004349605.1 uncharacterized protein ACA1_142080 [Acanthamoeba castellanii str. Neff] diamond 261 72 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30415428 30415428 PRJNA1087264_P_NODE_213_length_1323_cov_3.309262_g178_i0 PRJNA1087264 213 1323 3.309262 43.78153626 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 109 2.15e-22   NR AFD36233.1 5755 g178 i0 25.2 1.63718820861678 333 175 74.6 8 993 7 77 339 AFD36233.1 protein kinase C4, partial [Acanthamoeba castellanii] diamond 2166 109 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31236452 31236452 PRJNA1087264_P_NODE_10475_length_195_cov_1.047945_g10393_i0 PRJNA1087264 10475 195 1.047945 2.04349275 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 80.1 2.36e-17   NR XP_004348720.1 1257118 g10393 i0 57.1 0.969230769230769 63 27 96.9 0 194 6 51 113 XP_004348720.1 actin binding protein [Acanthamoeba castellanii str. Neff] diamond 189 80.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31797111 31797111 PRJNA1087264_P_NODE_19077_length_163_cov_0.894737_g18995_i0 PRJNA1087264 19077 163 0.894737 1.45842131 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 41.2 0.0426   NR XP_004352916.1 1257118 g18995 i0 53.1 1.39877300613497 32 15 58.9 0 59 154 40 71 XP_004352916.1 Lysozyme, putative [Acanthamoeba castellanii str. Neff] diamond 228 41.6 0.990384615384615 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32090699 32090699 PRJNA1087264_P_NODE_6638_length_246_cov_1.040609_g6556_i0 PRJNA1087264 6638 246 1.040609 2.55989814 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 94.4 6.359999999999999e-23   NR XP_004333362.1 1257118 g6556 i0 61.7 0.98780487804878 81 31 98.8 0 245 3 16 96 XP_004333362.1 ribosomal protein L21e, putative [Acanthamoeba castellanii str. Neff] diamond 243 94.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;