RNAquarium Metadata Server
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contig_metadata

10 rows where bioproject = "PRJNA1086823" and tax_phylum = "Negarnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 10 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1086823 · 10 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
193718 193718 PRJNA1086823_P_NODE_14741_length_249_cov_0.886364_g14624_i0 PRJNA1086823 14741 249 0.886364 2.20704636 Orthorubulavirus mammalis 3052558 Viruses Viruses 453 5.29e-123   NTclustered gi|1028325827|gb|KX060176.1| 2905673 g14624 i0 99.597 82.6666666666667 248 1 99 0 2 249 7047 6800 Parainfluenza virus 5 strain AGS, complete genome blastn 20584 453 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
4845509 4845509 PRJNA1086823_P_NODE_8444_length_288_cov_1.446512_g8327_i0 PRJNA1086823 8444 288 1.446512 4.16595456 Orthorubulavirus 2560195 Viruses Viruses 532 7.8e-147   NTclustered gi|1540352612|gb|MK117734.1| 2560580 g8327 i0 100 96.3125 288 0 100 0 1 288 1078 791 Mammalian orthorubulavirus 5 isolate XJ-WLMQ fusion protein mRNA, complete cds blastn 27738 532 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
8670661 8670661 PRJNA1086823_P_NODE_4647_length_366_cov_2.587031_g4530_i0 PRJNA1086823 4647 366 2.587031 9.46853346 Orthorubulavirus 2560195 Viruses Viruses 676 0   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g4530 i0 100 81.6939890710382 366 0 100 0 1 366 1798 2163 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 29900 676 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
9945581 9945581 PRJNA1086823_P_NODE_2028_length_527_cov_1.132159_g1912_i0 PRJNA1086823 2028 527 1.132159 5.96647793 Orthorubulavirus 2560195 Viruses Viruses 959 0   NTclustered gi|1540352612|gb|MK117734.1| 2560580 g1912 i0 99.619 97.6242884250474 525 2 99 0 1 525 255 779 Mammalian orthorubulavirus 5 isolate XJ-WLMQ fusion protein mRNA, complete cds blastn 51448 965 0.993782383419689 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
9945584 9945584 PRJNA1086823_P_NODE_2588_length_474_cov_1.486284_g2471_i0 PRJNA1086823 2588 474 1.486284 7.04498616 Orthorubulavirus 2560195 Viruses Viruses 870 0   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g2471 i0 99.789 70 474 1 100 0 1 474 1564 1091 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 33180 870 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
10397269 10397269 PRJNA1086823_P_NODE_8389_length_289_cov_1.032407_g8272_i0 PRJNA1086823 8389 289 1.032407 2.98365623 Orthorubulavirus mammalis 3052558 Viruses Viruses 508 1.32e-139   NTclustered gi|1028325827|gb|KX060176.1| 2905673 g8272 i0 98.616 84.8927335640138 289 1 100 1 1 289 2269 2554 Parainfluenza virus 5 strain AGS, complete genome blastn 24534 508 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
13770731 13770731 PRJNA1086823_P_NODE_14451_length_249_cov_1.329545_g14334_i0 PRJNA1086823 14451 249 1.329545 3.31056705 Orthorubulavirus 2560195 Viruses Viruses 460 3.16e-125   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g14334 i0 100 67.9919678714859 249 0 100 0 1 249 3913 4161 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 16930 460 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
13770751 13770751 PRJNA1086823_P_NODE_2331_length_495_cov_2.431280_g2214_i0 PRJNA1086823 2331 495 2.43128 12.034836 Orthorubulavirus 2560195 Viruses Viruses 909 0   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g2214 i0 99.798 67.7373737373737 495 1 100 0 1 495 3116 3610 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 33530 909 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
18869052 18869052 PRJNA1086823_P_NODE_7595_length_299_cov_1.637168_g7478_i0 PRJNA1086823 7595 299 1.637168 4.89513232 Orthorubulavirus 2560195 Viruses Viruses 542 1.35e-149   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g7478 i0 99.331 83 299 2 100 0 1 299 7679 7381 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 24817 547 0.990859232175503 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
22694289 22694289 PRJNA1086823_P_NODE_1958_length_534_cov_1.644252_g1842_i0 PRJNA1086823 1958 534 1.644252 8.78030568 Orthorubulavirus 2560195 Viruses Viruses 981 0   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g1842 i0 99.813 83.4157303370787 534 1 100 0 1 534 70 603 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 44544 981 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;