RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1086823" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1086823 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26687620 26687620 PRJNA1086823_P_NODE_15521_length_248_cov_0.891429_g15404_i0 PRJNA1086823 15521 248 0.891429 2.21074392 Minisyncoccota bacterium 2053589 Bacteria Bacteria 162 5.92e-45   NR MFA6524114.1 2053589 g15404 i0 90.2 2.9758064516129 82 8 99.2 0 248 3 407 488 MFA6524114.1 AlwI family type II restriction endonuclease [Candidatus Paceibacterota bacterium] diamond 738 162 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32533829 32533829 PRJNA1086823_P_NODE_15099_length_248_cov_1.017143_g14982_i0 PRJNA1086823 15099 248 1.017143 2.52251464 Minisyncoccota bacterium 2053589 Bacteria Bacteria 53.1 1.12e-6   NR MDR3570671.1 2053589 g14982 i0 47.3 0.895161290322581 74 32 81 2 247 47 35 108 MDR3570671.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 222 53.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;