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contig_metadata

11 rows where bioproject = "PRJNA1086823" and tax_phylum = "Chytridiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1086823 · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15496418 15496418 PRJNA1086823_P_NODE_1693_length_572_cov_2.076152_g1578_i0 PRJNA1086823 1693 572 2.076152 11.87558944 Polychytrium aggregatum 110093 Fungi Fungi 54.7 0.016   NTclustered gi|2432144566|ref|XM_053115345.1| 110093 g1578 i0 100 0.0506993006993007 29 0 5 0 220 248 581 553 Polychytrium aggregatum ran-specific GTPase-activating protein (BJ171DRAFT_616054), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
19319539 19319539 PRJNA1086823_P_NODE_19056_length_242_cov_0.923077_g18939_i0 PRJNA1086823 19056 242 0.923077 2.23384634 Spizellomyces sp. 'palustris' 117820 Fungi Fungi 89.8 1.66e-13   NTclustered gi|1693299050|ref|NC_042879.1| 117820 g18939 i0 88 0.309917355371901 75 9 31 0 167 241 16357 16431 Spizellomyces palustris culture CBS:455.65 strain CBS 455.65 mitochondrion, complete genome blastn 75 89.8 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces sp. 'palustris'
23145865 23145865 PRJNA1086823_P_NODE_1279_length_664_cov_5.950931_g1166_i0 PRJNA1086823 1279 664 5.950931 39.51418184 Chytridiales sp. WB228 1445026 Fungi Fungi 152 6.339999999999999e-32   NTclustered gi|575396701|gb|KC691362.1| 1445026 g1166 i0 84.049 20.2274096385542 163 20 24 6 243 403 323 165 Chytridiales sp. WB228 28S ribosomal RNA gene, partial sequence blastn 13431 152 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales     Chytridiales sp. WB228
24419658 24419658 PRJNA1086823_P_NODE_19420_length_239_cov_4.463855_g19303_i0 PRJNA1086823 19420 239 4.463855 10.66861345 Neocallimastix frontalis 4757 Fungi Fungi 82.4 2.74e-11   NTclustered gi|2245515459|gb|ON614415.1| 4757 g19303 i0 86.25 9.21338912133891 80 6 33 4 159 238 259 333 Neocallimastix frontalis clone YoRe30_7 large subunit ribosomal RNA gene, partial sequence blastn 2202 82.4 1 Eukaryota Opisthokonta Fungi Chytridiomycota Neocallimastigomycetes Neocallimastigales Neocallimastigaceae Neocallimastix Neocallimastix frontalis
28488756 28488756 PRJNA1086823_P_NODE_17527_length_244_cov_1.824561_g17410_i0 PRJNA1086823 17527 244 1.824561 4.45192884 Siphonaria sp. JEL 2047469 Fungi Fungi 73.6 7.96e-14   NR KAJ3026490.1 2723227 g17410 i0 51.3 0.934426229508197 76 37 93.4 0 2 229 47 122 KAJ3026490.1 Meiotic nuclear division protein 1 [Siphonaria sp. JEL0065] diamond 228 73.6 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Siphonaria Siphonaria sp. JEL0065
29246397 29246397 PRJNA1086823_P_NODE_3429_length_417_cov_8.848837_g3312_i0 PRJNA1086823 3429 417 8.848837 36.89965029 Cladochytrium tenue 1604274 Fungi Fungi 154 1.6699999999999998e-45   NR KAJ1568147.1 1604274 g3312 i0 63.3 1.86330935251799 128 47 92.1 0 402 19 4 131 KAJ1568147.1 60S ribosomal protein L32 [Cladochytrium tenue] diamond 777 154 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Cladochytriales Cladochytriaceae Cladochytrium Cladochytrium tenue
30794113 30794113 PRJNA1086823_P_NODE_17454_length_245_cov_0.906977_g17337_i0 PRJNA1086823 17454 245 0.906977 2.22209365 Polyrhizophydium stewartii 2732419 Fungi Fungi 62 6.37e-9   NR KAL2912896.1 2732419 g17337 i0 42 7.81224489795918 81 41 96.7 2 239 3 1349 1425 KAL2912896.1 proteasome component M29 [Polyrhizophydium stewartii] diamond 1914 62 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Polyrhizophydium Polyrhizophydium stewartii
31101453 31101453 PRJNA1086823_P_NODE_8395_length_288_cov_2.972093_g8278_i0 PRJNA1086823 8395 288 2.972093 8.55962784 Fungi 4751 Fungi Fungi 107 8.349999999999999e-28   NR KAJ3245456.1 4814 g8278 i0 61.6 29.09375 86 33 89.6 0 287 30 37 122 KAJ3245456.1 60S ribosomal protein L30 [Chytriomyces hyalinus] diamond 8379 108 0.990740740740741 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Chytriomyces Chytriomyces hyalinus
31268244 31268244 PRJNA1086823_P_NODE_4835_length_361_cov_1.319444_g4718_i0 PRJNA1086823 4835 361 1.319444 4.76319284 Batrachochytrium salamandrivorans 1357716 Fungi Fungi 106 2.3e-26   NR KAH6601223.1 1357716 g4718 i0 51.9 2.70914127423823 108 50 89.8 2 332 9 1 106 KAH6601223.1 hypothetical protein BASA50_001749 [Batrachochytrium salamandrivorans] diamond 978 106 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium salamandrivorans
31331388 31331388 PRJNA1086823_P_NODE_17516_length_244_cov_1.824561_g17399_i0 PRJNA1086823 17516 244 1.824561 4.45192884 Batrachochytrium salamandrivorans 1357716 Fungi Fungi 53.1 8.43e-7   NR KAH9257738.1 1357716 g17399 i0 38.4 0.897540983606557 73 44 89.8 1 3 221 24 95 KAH9257738.1 hypothetical protein BASA81_004204 [Batrachochytrium salamandrivorans] diamond 219 53.1 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium salamandrivorans
31828746 31828746 PRJNA1086823_P_NODE_17597_length_244_cov_1.216374_g17480_i0 PRJNA1086823 17597 244 1.216374 2.96795256 Chytridiaceae 4812 Fungi Fungi 67.8 3.84e-12   NR KAI8847197.1 64509 g17480 i0 48.6 1.89344262295082 74 38 91 0 244 23 25 98 KAI8847197.1 Rpl14 protein [Chytridium lagenaria] diamond 462 68.2 0.994134897360704 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Chytridium Chytridium lagenaria

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;