RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1086823" and tax_phylum = "Candidatus Glassiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Glassiibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1086823 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28322200 28322200 PRJNA1086823_P_NODE_7886_length_294_cov_2.117647_g7769_i0 PRJNA1086823 7886 294 2.117647 6.22588218 Bacillati 1783272 Bacteria Bacteria 55.5 2.36e-6   NR HUU87281.1 2602803 g7769 i0 39.1 1.89795918367347 92 51 93.9 2 18 293 148 234 HUU87281.1 hypothetical protein [Candidatus Glassbacteria bacterium] diamond 558 55.5 1 Bacteria Bacteria candidate phyla   Candidatus Glassiibacteriota         Candidatus Glassbacteria bacterium
32714099 32714099 PRJNA1086823_P_NODE_2740_length_461_cov_1.927835_g2623_i0 PRJNA1086823 2740 461 1.927835 8.88731935 Pseudomonadati 3379134 Bacteria Bacteria 162 1.0499999999999996e-43   NR HUU87572.1 2602803 g2623 i0 51.4 10.5553145336226 148 71 95.7 1 20 460 267 414 HUU87572.1 NAD-dependent DNA ligase LigA [Candidatus Glassbacteria bacterium] diamond 4866 162 1 Bacteria Bacteria candidate phyla   Candidatus Glassiibacteriota         Candidatus Glassbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;