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contig_metadata

31 rows where bioproject = "PRJNA1086823", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 31 ✖

tax_phylum 1

  • Acidobacteriota · 31 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1086823 · 31 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
193683 193683 PRJNA1086823_P_NODE_13381_length_251_cov_0.876404_g13264_i0 PRJNA1086823 13381 251 0.876404 2.19977404 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 265 2.68e-66   NTclustered gi|2893358450|emb|OZ220742.1| 2651171 g13264 i0 86.179 83.3227091633466 246 32 98 2 1 245 249943 250187 MAG: Thermoanaerobaculia bacterium isolate 0db66e92-d31a-4200-8262-fff8455c21c0 genome assembly, chromosome: 1 blastn 20914 265 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
1017342 1017342 PRJNA1086823_P_NODE_8321_length_289_cov_1.592593_g8204_i0 PRJNA1086823 8321 289 1.592593 4.60259377 Acidobacterium 33973 Bacteria Bacteria 507 4.75e-139   NTclustered gi|470484216|ref|NR_076636.1| 33075 g8204 i0 98.27 102.643598615917 289 5 100 0 1 289 976 1264 Acidobacterium capsulatum strain 161 23S ribosomal RNA gene, complete sequence blastn 29664 512 0.990234375 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Acidobacterium Acidobacterium capsulatum
2744489 2744489 PRJNA1086823_P_NODE_18303_length_243_cov_0.917647_g18186_i0 PRJNA1086823 18303 243 0.917647 2.22988221 uncultured Acidobacteriaceae bacterium 194844 Bacteria Bacteria 124 4.579999999999999e-24   NTclustered gi|310755849|gb|HQ213739.1| 194844 g18186 i0 98.571 30.8559670781893 70 1 29 0 1 70 433 502 Uncultured Acidobacteriaceae bacterium clone 4_O02 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 7498 124 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   uncultured Acidobacteriaceae bacterium
6571568 6571568 PRJNA1086823_P_NODE_13126_length_252_cov_0.871508_g13009_i0 PRJNA1086823 13126 252 0.871508 2.19620016 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 126 1.3299999999999999e-24   NTclustered gi|2874254167|emb|OY970399.1| 171953 g13009 i0 96.154 11.0555555555556 78 2 31 1 1 77 669246 669169 MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.6 genome assembly, chromosome: 1 blastn 2786 126 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
7846463 7846463 PRJNA1086823_P_NODE_18687_length_243_cov_0.917647_g18570_i0 PRJNA1086823 18687 243 0.917647 2.22988221 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 149 1.6299999999999994e-42   NR HKY42514.1 2283092 g18570 i0 88.8 2.96296296296296 80 9 98.8 0 2 241 46 125 HKY42514.1 methyltransferase domain-containing protein [Pyrinomonadaceae bacterium] diamond 720 149 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
10397065 10397065 PRJNA1086823_P_NODE_14929_length_249_cov_0.886364_g14812_i0 PRJNA1086823 14929 249 0.886364 2.20704636 Bacteria 2 Bacteria Bacteria 156 3.369999999999999e-42   NR MBQ03011.1 1978231 g14812 i0 90.4 23 83 8 100 0 249 1 537 619 MBQ03011.1 hypothetical protein [Acidobacteriota bacterium] diamond 5727 156 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
10397279 10397279 PRJNA1086823_P_NODE_8729_length_285_cov_1.452830_g8612_i0 PRJNA1086823 8729 285 1.45283 4.1405655 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 488 1.6899999999999999e-133   NTclustered gi|2874254108|emb|OY970193.1| 171953 g8612 i0 97.552 316.298245614035 286 5 99 2 2 285 1690519 1690804 MAG: uncultured Acidobacteriota bacterium isolate MFD09206.bin.1.42 genome assembly, chromosome: 1 blastn 90145 488 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
15496625 15496625 PRJNA1086823_P_NODE_9853_length_274_cov_1.273632_g9736_i0 PRJNA1086823 9853 274 1.273632 3.48975168 Terriglobus tenax 1111115 Bacteria Bacteria 167 1.77e-48   NR WP_263409576.1 1111115 g9736 i0 84.6 0.996350364963504 91 14 99.6 0 1 273 156 246 WP_263409576.1 glycosyltransferase [Terriglobus tenax] diamond 273 167 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Terriglobus Terriglobus tenax
22694271 22694271 PRJNA1086823_P_NODE_16398_length_246_cov_0.901734_g16281_i0 PRJNA1086823 16398 246 0.901734 2.21826564 Bacteria 2 Bacteria Bacteria 193 1.25e-44   NTclustered gi|2874254049|emb|OY970373.1| 171953 g16281 i0 81.048 25.8252032520325 248 41 99 6 1 245 5979321 5979565 MAG: uncultured Acidobacteriota bacterium isolate MFD09368.bin.c.1 genome assembly, chromosome: 1 blastn 6353 193 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
27320462 27320462 PRJNA1086823_P_NODE_16063_length_247_cov_0.896552_g15946_i0 PRJNA1086823 16063 247 0.896552 2.21448344 Vicinamibacteria bacterium 2793154 Bacteria Bacteria 122 5.589999999999999e-31   NR HSF18030.1 2793154 g15946 i0 78.8 6.80161943319838 80 17 97.2 0 240 1 91 170 HSF18030.1 MFS transporter [Vicinamibacteria bacterium] diamond 1680 122 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria       Vicinamibacteria bacterium
27573033 27573033 PRJNA1086823_P_NODE_17964_length_244_cov_0.912281_g17847_i0 PRJNA1086823 17964 244 0.912281 2.22596564 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 82.8 1.95e-16   NR HEU4713899.1 2283092 g17847 i0 87.5 0.590163934426229 48 6 59 0 242 99 336 383 HEU4713899.1 VWA domain-containing protein [Pyrinomonadaceae bacterium] diamond 144 82.8 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
27951975 27951975 PRJNA1086823_P_NODE_12065_length_253_cov_0.866667_g11948_i0 PRJNA1086823 12065 253 0.866667 2.19266751 Candidatus Polarisedimenticolaceae bacterium 2910585 Bacteria Bacteria 124 1.09e-30   NR HEX6852427.1 2910585 g11948 i0 74.4 1.94466403162055 82 21 97.2 0 248 3 594 675 HEX6852427.1 ribonuclease R [Candidatus Polarisedimenticolaceae bacterium] diamond 492 124 1 Bacteria   Pseudomonadati Acidobacteriota Candidatus Polarisedimenticolia Candidatus Polarisedimenticolales Candidatus Polarisedimenticolaceae   Candidatus Polarisedimenticolaceae bacterium
27983457 27983457 PRJNA1086823_P_NODE_13905_length_250_cov_0.881356_g13788_i0 PRJNA1086823 13905 250 0.881356 2.20339 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 122 2.8699999999999997e-30   NR MEO8678761.1 2910147 g13788 i0 79.3 0.984 82 17 98.4 0 246 1 333 414 MEO8678761.1 ADOP family duplicated permease [Vicinamibacterales bacterium] diamond 246 122 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
28046607 28046607 PRJNA1086823_P_NODE_15945_length_247_cov_0.896552_g15828_i0 PRJNA1086823 15945 247 0.896552 2.21448344 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 137 1.26e-37   NR HKN83440.1 2283092 g15828 i0 74.4 3.01214574898785 86 17 98.4 1 4 246 156 241 HKN83440.1 metallophosphoesterase [Pyrinomonadaceae bacterium] diamond 744 137 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
28109643 28109643 PRJNA1086823_P_NODE_16325_length_246_cov_0.901734_g16208_i0 PRJNA1086823 16325 246 0.901734 2.21826564 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 106 1.19e-25   NR HUR22021.1 2910147 g16208 i0 66.3 0.975609756097561 80 26 97.6 1 5 244 147 225 HUR22021.1 hypothetical protein [Vicinamibacterales bacterium] diamond 240 106 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
28678284 28678284 PRJNA1086823_P_NODE_15327_length_248_cov_0.891429_g15210_i0 PRJNA1086823 15327 248 0.891429 2.21074392 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 51.2 3.99e-5   NR MCM2268510.1 2651171 g15210 i0 53.8 0.471774193548387 39 18 47.2 0 6 122 490 528 MCM2268510.1 glycosyltransferase family 4 protein [Thermoanaerobaculia bacterium] diamond 117 51.2 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
29341280 29341280 PRJNA1086823_P_NODE_14129_length_250_cov_0.881356_g14012_i0 PRJNA1086823 14129 250 0.881356 2.20339 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 152 1.17e-43   NR MCM2269353.1 2651171 g14012 i0 88 1.992 83 10 99.6 0 1 249 195 277 MCM2269353.1 serine/threonine protein kinase [Thermoanaerobaculia bacterium] diamond 498 152 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
29593371 29593371 PRJNA1086823_P_NODE_15570_length_248_cov_0.891429_g15453_i0 PRJNA1086823 15570 248 0.891429 2.21074392 Candidatus Acidiferrum sp. 3069120 Bacteria Bacteria 80.9 4.14e-18   NR HVH90963.1 3069120 g15453 i0 79.2 0.580645161290323 48 10 58.1 0 146 3 1 48 HVH90963.1 hypothetical protein [Candidatus Acidiferrum sp.] diamond 144 80.9 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Candidatus Acidiferrales   Candidatus Acidiferrum Candidatus Acidiferrum sp.
29751368 29751368 PRJNA1086823_P_NODE_13111_length_252_cov_0.871508_g12994_i0 PRJNA1086823 13111 252 0.871508 2.19620016 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 42.7 0.04   NR HEX4439095.1 2651171 g12994 i0 41.8 0.797619047619048 67 36 79.8 1 211 11 240 303 HEX4439095.1 cation:dicarboxylase symporter family transporter [Thermoanaerobaculia bacterium] diamond 201 42.7 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
30193779 30193779 PRJNA1086823_P_NODE_17412_length_245_cov_0.906977_g17295_i0 PRJNA1086823 17412 245 0.906977 2.22209365 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 94 2.79e-21   NR HEY0426322.1 2283092 g17295 i0 72.6 0.759183673469388 62 16 74.7 1 185 3 1 62 HEY0426322.1 arylamine N-acetyltransferase [Pyrinomonadaceae bacterium] diamond 186 94 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
30636032 30636032 PRJNA1086823_P_NODE_8013_length_292_cov_1.817352_g7896_i0 PRJNA1086823 8013 292 1.817352 5.30666784 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 45.8 0.00469   NR MEZ5293151.1 2910147 g7896 i0 94.7 1.36643835616438 19 1 19.5 0 57 1 5 23 MEZ5293151.1 methyltransferase domain-containing protein [Vicinamibacterales bacterium] diamond 399 45.8 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
31015364 31015364 PRJNA1086823_P_NODE_13735_length_251_cov_0.876404_g13618_i0 PRJNA1086823 13735 251 0.876404 2.19977404 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 144 4.88e-40   NR HVR28576.1 2651171 g13618 i0 89.2 0.99203187250996006 83 9 99.2 0 2 250 167 249 HVR28576.1 ATP-binding cassette domain-containing protein [Thermoanaerobaculia bacterium] diamond 249 144 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
31015369 31015369 PRJNA1086823_P_NODE_17375_length_245_cov_0.906977_g17258_i0 PRJNA1086823 17375 245 0.906977 2.22209365 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 122 1.01e-33   NR HEX6716745.1 2283092 g17258 i0 91 2.46122448979592 67 6 82 0 244 44 79 145 HEX6716745.1 PTS sugar transporter subunit IIA [Pyrinomonadaceae bacterium] diamond 603 122 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
31236440 31236440 PRJNA1086823_P_NODE_12275_length_253_cov_0.866667_g12158_i0 PRJNA1086823 12275 253 0.866667 2.19266751 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 46.6 0.00189   NR HWT46541.1 2910147 g12158 i0 39.7 0.924901185770751 78 40 90.1 4 17 244 632 704 HWT46541.1 protein kinase [Vicinamibacterales bacterium] diamond 234 46.6 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
31679255 31679255 PRJNA1086823_P_NODE_17717_length_244_cov_0.912281_g17600_i0 PRJNA1086823 17717 244 0.912281 2.22596564 Acidobacteriota bacterium 1978231 Bacteria Bacteria 78.6 8.25e-16   NR MBI2187874.1 1978231 g17600 i0 56.9 1.7827868852459 72 31 88.5 0 1 216 54 125 MBI2187874.1 hypothetical protein [Acidobacteriota bacterium] diamond 435 78.6 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31805886 31805886 PRJNA1086823_P_NODE_17077_length_245_cov_0.906977_g16960_i0 PRJNA1086823 17077 245 0.906977 2.22209365 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 147 1.85e-40   NR MEQ1909619.1 2910147 g16960 i0 88.9 0.991836734693878 81 9 99.2 0 1 243 148 228 MEQ1909619.1 acetate/propionate family kinase [Vicinamibacterales bacterium] diamond 243 147 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
31860402 31860402 PRJNA1086823_P_NODE_13637_length_251_cov_0.876404_g13520_i0 PRJNA1086823 13637 251 0.876404 2.19977404 Bacteria 2 Bacteria Bacteria 142 1.0099999999999999e-38   NR ANM30298.1 1660251 g13520 i0 81.9 1.9840637450199201 83 15 99.2 0 250 2 195 277 ANM30298.1 cell division protein FtsA [Acidobacteria bacterium Mor1] diamond 498 142 1 Bacteria Acidobacteriota subdivision 22 Pseudomonadati Acidobacteriota         Acidobacteria bacterium Mor1
32153982 32153982 PRJNA1086823_P_NODE_16478_length_246_cov_0.901734_g16361_i0 PRJNA1086823 16478 246 0.901734 2.21826564 Acidobacteriota bacterium 1978231 Bacteria Bacteria 135 7.149999999999998e-35   NR MCC7177186.1 1978231 g16361 i0 78 1.98780487804878 82 18 100 0 1 246 825 906 MCC7177186.1 TonB-dependent receptor [Acidobacteriota bacterium] diamond 489 135 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32153984 32153984 PRJNA1086823_P_NODE_18358_length_243_cov_0.917647_g18241_i0 PRJNA1086823 18358 243 0.917647 2.22988221 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 116 1.6899999999999998e-31   NR HZM99902.1 2283092 g18241 i0 73.8 0.987654320987654 80 18 98.8 1 3 242 17 93 HZM99902.1 hypothetical protein [Pyrinomonadaceae bacterium] diamond 240 116 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
32367021 32367021 PRJNA1086823_P_NODE_15779_length_247_cov_0.896552_g15662_i0 PRJNA1086823 15779 247 0.896552 2.21448344 Bacteria 2 Bacteria Bacteria 123 1.9099999999999998e-31   NR PYS26320.1 1978231 g15662 i0 72 1.9919028340081 82 23 99.6 0 247 2 234 315 PYS26320.1 MAG: hypothetical protein DMG11_20290 [Acidobacteriota bacterium] diamond 492 124 0.991935483870968 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32650901 32650901 PRJNA1086823_P_NODE_18020_length_244_cov_0.912281_g17903_i0 PRJNA1086823 18020 244 0.912281 2.22596564 Bacteria 2 Bacteria Bacteria 142 1.32e-38   NR MDX6693153.1 2052146 g17903 i0 86.1 2.93852459016393 79 11 97.1 0 3 239 251 329 MDX6693153.1 hypothetical protein [Blastocatellia bacterium] diamond 717 142 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;