RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1086823", tax_kingdom = "Thermotogati" and tax_phylum = "Synergistota"

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tax_superkingdom 1

tax_phylum 1

  • Synergistota · 3 ✖

tax_kingdom 1

  • Thermotogati · 3 ✖

bioproject 1

  • PRJNA1086823 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29174933 29174933 PRJNA1086823_P_NODE_15409_length_248_cov_0.891429_g15292_i0 PRJNA1086823 15409 248 0.891429 2.21074392 Bacteria 2 Bacteria Bacteria 47.4 2.47e-4   NR OPZ40892.1 1852916 g15292 i0 36.4 1.57258064516129 66 36 72.6 1 69 248 16 81 OPZ40892.1 MAG: hypothetical protein BWY99_00399 [Synergistetes bacterium ADurb.BinA166] diamond 390 47.4 1 Bacteria   Thermotogati Synergistota         Synergistetes bacterium ADurb.BinA166
31268237 31268237 PRJNA1086823_P_NODE_16815_length_246_cov_0.867052_g16698_i0 PRJNA1086823 16815 246 0.867052 2.13294792 Acetomicrobium 49894 Bacteria Bacteria 171 2.29e-48   NR WP_303882222.1 49894 g16698 i0 98.8 1 82 1 100 0 246 1 35 116 WP_303882222.1 MULTISPECIES: alpha-glucan family phosphorylase [Acetomicrobium] diamond 246 171 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Acetomicrobiaceae Acetomicrobium  
32848614 32848614 PRJNA1086823_P_NODE_8020_length_292_cov_1.680365_g7903_i0 PRJNA1086823 8020 292 1.680365 4.9066658 Synergistetes bacterium ADurb.BinA166 1852916 Bacteria Bacteria 70.9 6.89e-12   NR OPZ37910.1 1852916 g7903 i0 38.5 0.934931506849315 91 56 93.5 0 290 18 50 140 OPZ37910.1 MAG: Glycosyl transferases group 1 [Synergistetes bacterium ADurb.BinA166] diamond 273 70.9 1 Bacteria   Thermotogati Synergistota         Synergistetes bacterium ADurb.BinA166

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;