contig_metadata
13 rows where bioproject = "PRJNA1086823", tax_kingdom = "Pseudomonadati" and tax_phylum = "Thermodesulfobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2292727 | 2292727 | PRJNA1086823_P_NODE_15942_length_247_cov_0.896552_g15825_i0 | PRJNA1086823 | 15942 | 247 | 0.896552 | 2.21448344 | Geobacter | 28231 | Bacteria | Bacteria | 176 | 1.27e-39 | NTclustered | gi|2499315885|dbj|AP028061.1| | 1260928 | g15825 | i0 | 82.99 | 56.7044534412955 | 194 | 33 | 79 | 0 | 46 | 239 | 1773518 | 1773711 | Geobacter sulfurreducens subsp. ethanolicus OSK2A DNA, complete genome | blastn | 14006 | 176 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacter | Geobacter sulfurreducens | ||
| 2292741 | 2292741 | PRJNA1086823_P_NODE_18662_length_243_cov_0.917647_g18545_i0 | PRJNA1086823 | 18662 | 243 | 0.917647 | 2.22988221 | Bilophila | 35832 | Bacteria | Bacteria | 161 | 3.4999999999999998e-46 | NR | MFQ9492039.1 | 35833 | g18545 | i0 | 100 | 4.9382716049382704 | 80 | 0 | 98.8 | 0 | 241 | 2 | 211 | 290 | MFQ9492039.1 sigma-54 interaction domain-containing protein [Bilophila wadsworthia] | diamond | 1200 | 161 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Bilophila | Bilophila wadsworthia | ||
| 2744328 | 2744328 | PRJNA1086823_P_NODE_10463_length_268_cov_1.533333_g10346_i0 | PRJNA1086823 | 10463 | 268 | 1.533333 | 4.10933244 | Desulfomicrobium orale | 132132 | Bacteria | Bacteria | 484 | 2.0399999999999996e-132 | NTclustered | gi|987456218|gb|CP014230.1| | 888061 | g10346 | i0 | 99.254 | 1 | 268 | 2 | 100 | 0 | 1 | 268 | 1362227 | 1362494 | Desulfomicrobium orale DSM 12838 chromosome, complete genome | blastn | 268 | 484 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfomicrobiaceae | Desulfomicrobium | Desulfomicrobium orale | ||
| 9121385 | 9121385 | PRJNA1086823_P_NODE_16408_length_246_cov_0.901734_g16291_i0 | PRJNA1086823 | 16408 | 246 | 0.901734 | 2.21826564 | Desulfovibrio subterraneus | 2718620 | Bacteria | Bacteria | 455 | 1.4500000000000002e-123 | NTclustered | gi|2419088003|gb|CP087381.1| | 2718620 | g16291 | i0 | 100 | 1 | 246 | 0 | 100 | 0 | 1 | 246 | 3715163 | 3715408 | Desulfovibrio subterraneus strain ND17 chromosome, complete genome | blastn | 246 | 455 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio subterraneus | ||
| 14222396 | 14222396 | PRJNA1086823_P_NODE_13992_length_250_cov_0.881356_g13875_i0 | PRJNA1086823 | 13992 | 250 | 0.881356 | 2.20339 | Desulfovibrio subterraneus | 2718620 | Bacteria | Bacteria | 462 | 8.83e-126 | NTclustered | gi|2419088003|gb|CP087381.1| | 2718620 | g13875 | i0 | 100 | 1 | 250 | 0 | 100 | 0 | 1 | 250 | 2391188 | 2391437 | Desulfovibrio subterraneus strain ND17 chromosome, complete genome | blastn | 250 | 462 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio subterraneus | ||
| 14222589 | 14222589 | PRJNA1086823_P_NODE_5512_length_342_cov_1.141264_g5395_i0 | PRJNA1086823 | 5512 | 342 | 1.141264 | 3.90312288 | Desulfovibrio subterraneus | 2718620 | Bacteria | Bacteria | 632 | 9.079999999999999e-177 | NTclustered | gi|2419088003|gb|CP087381.1| | 2718620 | g5395 | i0 | 100 | 5.41520467836257 | 342 | 0 | 100 | 0 | 1 | 342 | 1222902 | 1222561 | Desulfovibrio subterraneus strain ND17 chromosome, complete genome | blastn | 1852 | 632 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio subterraneus | ||
| 21870609 | 21870609 | PRJNA1086823_P_NODE_18318_length_243_cov_0.917647_g18201_i0 | PRJNA1086823 | 18318 | 243 | 0.917647 | 2.22988221 | Desulfovibrio subterraneus | 2718620 | Bacteria | Bacteria | 449 | 6.65e-122 | NTclustered | gi|2419088003|gb|CP087381.1| | 2718620 | g18201 | i0 | 100 | 1 | 243 | 0 | 100 | 0 | 1 | 243 | 755268 | 755026 | Desulfovibrio subterraneus strain ND17 chromosome, complete genome | blastn | 243 | 449 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio subterraneus | ||
| 26687619 | 26687619 | PRJNA1086823_P_NODE_11401_length_258_cov_2.367568_g11284_i0 | PRJNA1086823 | 11401 | 258 | 2.367568 | 6.10832544 | Thermodesulfobacteriota bacterium | 2202153 | Bacteria | Bacteria | 142 | 2.07e-41 | NR | GJM17675.1 | 2202153 | g11284 | i0 | 79.1 | 2 | 86 | 18 | 100 | 0 | 1 | 258 | 13 | 98 | GJM17675.1 MAG: hypothetical protein DHS20C13_30020 [Thermodesulfobacteriota bacterium] | diamond | 516 | 143 | 0.993006993006993 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteriota bacterium | ||||||
| 28488753 | 28488753 | PRJNA1086823_P_NODE_13287_length_251_cov_0.876404_g13170_i0 | PRJNA1086823 | 13287 | 251 | 0.876404 | 2.19977404 | Desulfobacterales bacterium | 2044940 | Bacteria | Bacteria | 177 | 2.91e-50 | NR | MCJ7642464.1 | 2044940 | g13170 | i0 | 98.8 | 0.99203187250996006 | 83 | 1 | 99.2 | 0 | 1 | 249 | 243 | 325 | MCJ7642464.1 hypothetical protein [Desulfobacterales bacterium] | diamond | 249 | 177 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacterales bacterium | ||||
| 28583570 | 28583570 | PRJNA1086823_P_NODE_9387_length_278_cov_2.912195_g9270_i0 | PRJNA1086823 | 9387 | 278 | 2.912195 | 8.0959021 | Desulfosarcina sp. BuS5 | 933262 | Bacteria | Bacteria | 79 | 8.03e-15 | NR | WP_035266092.1 | 933262 | g9270 | i0 | 51.4 | 1.55395683453237 | 72 | 34 | 76.6 | 1 | 215 | 3 | 9 | 80 | WP_035266092.1 RNA-guided endonuclease InsQ/TnpB family protein [Desulfosarcina sp. BuS5] | diamond | 432 | 79 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfosarcinaceae | Desulfosarcina | Desulfosarcina sp. BuS5 | ||
| 30153456 | 30153456 | PRJNA1086823_P_NODE_14132_length_250_cov_0.881356_g14015_i0 | PRJNA1086823 | 14132 | 250 | 0.881356 | 2.20339 | Bilophila | 35832 | Bacteria | Bacteria | 165 | 6.51e-50 | NR | MFR9039952.1 | 35833 | g14015 | i0 | 100 | 4.98 | 83 | 0 | 99.6 | 0 | 249 | 1 | 15 | 97 | MFR9039952.1 ABC transporter permease [Bilophila wadsworthia] | diamond | 1245 | 165 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Bilophila | Bilophila wadsworthia | ||
| 31173010 | 31173010 | PRJNA1086823_P_NODE_19255_length_242_cov_0.923077_g19138_i0 | PRJNA1086823 | 19255 | 242 | 0.923077 | 2.23384634 | Syntrophobacteraceae bacterium | 2052185 | Bacteria | Bacteria | 47 | 4.05e-4 | NR | MEM5786530.1 | 2052185 | g19138 | i0 | 36.7 | 1.67355371900826 | 60 | 38 | 74.4 | 0 | 3 | 182 | 5 | 64 | MEM5786530.1 DnaB-like helicase C-terminal domain-containing protein [Syntrophobacteraceae bacterium] | diamond | 405 | 47 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophobacteria | Syntrophobacterales | Syntrophobacteraceae | Syntrophobacteraceae bacterium | |||
| 32628089 | 32628089 | PRJNA1086823_P_NODE_18280_length_243_cov_0.917647_g18163_i0 | PRJNA1086823 | 18280 | 243 | 0.917647 | 2.22988221 | Desulfobacterales bacterium | 2044940 | Bacteria | Bacteria | 71.2 | 3.28e-12 | NR | NVM23844.1 | 2044940 | g18163 | i0 | 46.8 | 0.975308641975309 | 79 | 42 | 97.5 | 0 | 5 | 241 | 37 | 115 | NVM23844.1 phage tail tape measure protein [Desulfobacterales bacterium] | diamond | 237 | 71.2 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacterales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;