RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1086823", tax_kingdom = "Metazoa" and tax_phylum = "Placozoa"

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tax_superkingdom 1

tax_phylum 1

  • Placozoa · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1086823 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15496415 15496415 PRJNA1086823_P_NODE_16813_length_246_cov_0.872832_g16696_i0 PRJNA1086823 16813 246 0.872832 2.14716672 Trichoplax adhaerens 10228 Placozoa other_Eukaryota 96.3 4.97e-21   NR XP_002117230.1 10228 g16696 i0 58.8 0.975609756097561 80 30 97.6 1 245 6 420 496 XP_002117230.1 uncharacterized protein TRIADDRAFT_63418 [Trichoplax adhaerens] diamond 240 96.3 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens
30121985 30121985 PRJNA1086823_P_NODE_14372_length_249_cov_2.659091_g14255_i0 PRJNA1086823 14372 249 2.659091 6.62113659 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 70.9 1.3e-13   NR XP_002115778.1 10228 g14255 i0 37 7.48192771084337 81 50 96.4 1 249 10 28 108 XP_002115778.1 uncharacterized protein TRIADDRAFT_59829 [Trichoplax adhaerens] diamond 1863 70.9 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;