RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1086823", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1086823 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28425656 28425656 PRJNA1086823_P_NODE_17266_length_245_cov_0.906977_g17149_i0 PRJNA1086823 17266 245 0.906977 2.22209365 Perkinsus chesapeaki 330153 SAR_Eukaryotes SAR_Eukaryotes 50.1 1.02e-4   NR KAF4677739.1 330153 g17149 i0 30.5 2.00816326530612 82 56 99.2 1 243 1 1115 1196 KAF4677739.1 hypothetical protein FOL47_010960 [Perkinsus chesapeaki] diamond 492 50.1 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus chesapeaki
29238016 29238016 PRJNA1086823_P_NODE_6049_length_329_cov_1.828125_g5932_i0 PRJNA1086823 6049 329 1.828125 6.01453125 Dinophyceae 2864 SAR_Eukaryotes SAR_Eukaryotes 121 1.9099999999999998e-31   NR KAF4666721.1 32597 g5932 i0 53.5 13.4407294832827 99 46 90.3 0 3 299 83 181 KAF4666721.1 Proteasome subunit alpha type-7 [Perkinsus olseni] diamond 4422 122 0.991803278688525 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;