RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1086823", tax_clade = "Opisthokonta" and tax_phylum = "Annelida"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA1086823 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11672367 11672367 PRJNA1086823_P_NODE_14310_length_250_cov_0.881356_g14193_i0 PRJNA1086823 14310 250 0.881356 2.20339 Perionyx excavatus 168854 Annelida Annelida 95.3 3.71e-15   NTclustered gi|150375678|ref|NC_009631.1| 168854 g14193 i0 74.468 0.94 235 53 93 7 1 232 11223 11453 Perionyx excavatus mitochondrion, complete genome blastn 235 95.3 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Megascolecidae Perionyx Perionyx excavatus
20143736 20143736 PRJNA1086823_P_NODE_13976_length_250_cov_0.881356_g13859_i0 PRJNA1086823 13976 250 0.881356 2.20339 Clitellata 42113 Annelida Annelida 200 7.639999999999999e-47   NTclustered gi|33330161|gb|AF534865.1| 76587 g13859 i0 87.425 83.476 167 21 67 0 1 167 1054 1220 Limnodrilus hoffmeisteri isolate LIMhohr cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial gene for mitochondrial product blastn 20869 200 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Tubificida Naididae Limnodrilus Limnodrilus hoffmeisteri
27627792 27627792 PRJNA1086823_P_NODE_17224_length_245_cov_0.906977_g17107_i0 PRJNA1086823 17224 245 0.906977 2.22209365 Terebellida 6373 Annelida Annelida 75.9 8.13e-14   NR KAK2141111.1 53620 g17107 i0 47.5 2.96326530612245 80 41 98 1 244 5 303 381 KAK2141111.1 hypothetical protein LSH36_1159g00016 [Paralvinella palmiformis] diamond 726 75.9 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Terebellida Alvinellidae Paralvinella Paralvinella palmiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;