RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1086823", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Rokuibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Rokuibacteriota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA1086823 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29553397 29553397 PRJNA1086823_P_NODE_15510_length_248_cov_0.891429_g15393_i0 PRJNA1086823 15510 248 0.891429 2.21074392 Bacteria 2 Bacteria Bacteria 95.9 4.26e-22   NR OLC11371.1 1805368 g15393 i0 90 3.0241935483871 50 5 60.5 0 99 248 1 50 OLC11371.1 MAG: hypothetical protein AUH26_06650, partial [Candidatus Rokubacteria bacterium 13_1_40CM_69_96] diamond 750 95.9 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokubacteria bacterium 13_1_40CM_69_96
29562062 29562062 PRJNA1086823_P_NODE_13750_length_251_cov_0.876404_g13633_i0 PRJNA1086823 13750 251 0.876404 2.19977404 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 132 2.31e-34   NR MET0487356.1 2053607 g13633 i0 79.5 0.99203187250996006 83 17 99.2 0 249 1 354 436 MET0487356.1 hypothetical protein [Candidatus Rokuibacteriota bacterium] diamond 249 132 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
30320806 30320806 PRJNA1086823_P_NODE_13712_length_251_cov_0.876404_g13595_i0 PRJNA1086823 13712 251 0.876404 2.19977404 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 145 3.31e-41   NR PYN01841.1 2053607 g13595 i0 80.7 1.9840637450199201 83 16 99.2 0 251 3 166 248 PYN01841.1 MAG: hypothetical protein DME07_12405 [Candidatus Rokuibacteriota bacterium] diamond 498 145 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;