contig_metadata
14 rows where bioproject = "PRJNA1086823" and tax_clade = "Amoebozoa"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 193640 | 193640 | PRJNA1086823_P_NODE_11341_length_259_cov_1.634409_g11224_i0 | PRJNA1086823 | 11341 | 259 | 1.634409 | 4.23311931 | Amoebozoa sp. | 1892891 | Root_unresolved | Root_unresolved | 259 | 1.29e-64 | NTclustered | gi|2651357787|gb|PP174302.1| | 1892891 | g11224 | i0 | 90.452 | 40.6525096525097 | 199 | 15 | 77 | 3 | 16 | 214 | 3954 | 4148 | Amoebozoa sp. isolate 2M small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence | blastn | 10529 | 259 | 1 | Eukaryota | Amoebozoa | Amoebozoa sp. | |||||||
| 193687 | 193687 | PRJNA1086823_P_NODE_13561_length_251_cov_0.876404_g13444_i0 | PRJNA1086823 | 13561 | 251 | 0.876404 | 2.19977404 | Ripella platypodia | 2047821 | Discosea | other_Eukaryota | 429 | 8.99e-116 | NTclustered | gi|1269228378|gb|MF683503.1| | 2047821 | g13444 | i0 | 97.61 | 100.792828685259 | 251 | 4 | 100 | 1 | 1 | 251 | 1510 | 1262 | Ripella platypodia clone 26.10.41 18S ribosomal RNA gene, partial sequence | blastn | 25299 | 429 | 1 | Eukaryota | Amoebozoa | Discosea | Flabellinia | Vannellidae | Ripella | Ripella platypodia | |||
| 193863 | 193863 | PRJNA1086823_P_NODE_4981_length_357_cov_1.070423_g4864_i0 | PRJNA1086823 | 4981 | 357 | 1.070423 | 3.82141011 | Planoprotostelium fungivorum | 1890364 | Evosea | other_Eukaryota | 174 | 3.34e-50 | NR | PRP84143.1 | 1890364 | g4864 | i0 | 75.2 | 20.2100840336134 | 109 | 27 | 91.6 | 0 | 30 | 356 | 280 | 388 | PRP84143.1 hypothetical protein PROFUN_04134 [Planoprotostelium fungivorum] | diamond | 7215 | 174 | 1 | Eukaryota | Amoebozoa | Evosea | Variosea | Cavosteliida | Cavosteliaceae | Planoprotostelium | Planoprotostelium fungivorum | ||
| 1468576 | 1468576 | PRJNA1086823_P_NODE_8462_length_288_cov_1.255814_g8345_i0 | PRJNA1086823 | 8462 | 288 | 1.255814 | 3.61674432 | Acanthamoeba castellanii | 5755 | Discosea | other_Eukaryota | 276 | 1.45e-69 | NTclustered | gi|300078498|gb|GU001160.1| | 5755 | g8345 | i0 | 85.764 | 21.1388888888889 | 288 | 10 | 100 | 16 | 1 | 288 | 5438 | 5694 | Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence | blastn | 6088 | 276 | 1 | Eukaryota | Amoebozoa | Discosea | Longamoebia | Acanthamoebidae | Acanthamoeba | Acanthamoeba castellanii | |||
| 15496316 | 15496316 | PRJNA1086823_P_NODE_12573_length_252_cov_1.664804_g12456_i0 | PRJNA1086823 | 12573 | 252 | 1.664804 | 4.19530608 | Vexillifera bacillipedes | 1105345 | Discosea | other_Eukaryota | 466 | 6.89e-127 | NTclustered | gi|399764261|gb|JQ271772.1| | 1105345 | g12456 | i0 | 100 | 73.9285714285714 | 252 | 0 | 100 | 0 | 1 | 252 | 303 | 554 | Vexillifera bacillipedes strain 6HZM 18S ribosomal RNA gene, partial sequence | blastn | 18630 | 466 | 1 | Eukaryota | Amoebozoa | Discosea | Flabellinia | Dactylopodida | Vexilliferidae | Vexillifera | Vexillifera bacillipedes | ||
| 15496604 | 15496604 | PRJNA1086823_P_NODE_8733_length_285_cov_1.424528_g8616_i0 | PRJNA1086823 | 8733 | 285 | 1.424528 | 4.0599048 | Vannella septentrionalis | 197531 | Discosea | other_Eukaryota | 490 | 4.71e-134 | NTclustered | gi|300078499|gb|GU001161.1| | 197531 | g8616 | i0 | 97.88 | 80.2456140350877 | 283 | 6 | 99 | 0 | 1 | 283 | 947 | 1229 | Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence | blastn | 22870 | 490 | 1 | Eukaryota | Amoebozoa | Discosea | Flabellinia | Vannellidae | Vannella | Vannella septentrionalis | |||
| 18045460 | 18045460 | PRJNA1086823_P_NODE_15655_length_247_cov_1.511494_g15538_i0 | PRJNA1086823 | 15655 | 247 | 1.511494 | 3.73339018 | Lobosea sp. Borok | 297386 | Tubulinea | other_Eukaryota | 433 | 6.82e-117 | NTclustered | gi|54306228|gb|AY626163.1| | 297386 | g15538 | i0 | 98.381 | 100.611336032389 | 247 | 3 | 100 | 1 | 1 | 247 | 973 | 728 | Lobosea sp. Borok small subunit ribosomal RNA gene, partial sequence | blastn | 24851 | 433 | 1 | Eukaryota | Amoebozoa | Tubulinea | Lobosea sp. Borok | ||||||
| 23146096 | 23146096 | PRJNA1086823_P_NODE_6239_length_325_cov_3.043651_g6122_i0 | PRJNA1086823 | 6239 | 325 | 3.043651 | 9.89186575 | uncultured Amoebozoa | 590481 | Root_unresolved | Root_unresolved | 579 | 1.1299999999999997e-160 | NTclustered | gi|507138087|gb|KC583131.1| | 590481 | g6122 | i0 | 98.769 | 91.4707692307692 | 325 | 4 | 100 | 0 | 1 | 325 | 420 | 96 | Uncultured Amoebozoa clone RS.01f.10m.23 18S ribosomal RNA gene, partial sequence | blastn | 29728 | 579 | 1 | Eukaryota | Amoebozoa | uncultured Amoebozoa | |||||||
| 25243768 | 25243768 | PRJNA1086823_P_NODE_8380_length_289_cov_1.083333_g8263_i0 | PRJNA1086823 | 8380 | 289 | 1.083333 | 3.13083237 | Acanthamoeba castellanii str. Neff | 1257118 | Discosea | other_Eukaryota | 159 | 2.35e-48 | NR | XP_004339588.1 | 1257118 | g8263 | i0 | 90.7 | 1.78546712802768 | 86 | 8 | 89.3 | 0 | 31 | 288 | 5 | 90 | XP_004339588.1 60S ribosomal protein, putative [Acanthamoeba castellanii str. Neff] | diamond | 516 | 159 | 1 | Eukaryota | Amoebozoa | Discosea | Longamoebia | Acanthamoebidae | Acanthamoeba | Acanthamoeba castellanii | |||
| 27312037 | 27312037 | PRJNA1086823_P_NODE_12783_length_252_cov_0.871508_g12666_i0 | PRJNA1086823 | 12783 | 252 | 0.871508 | 2.19620016 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 95.9 | 8.340000000000001e-21 | NR | XP_004359899.1 | 261658 | g12666 | i0 | 51.8 | 1.97619047619048 | 83 | 39 | 98.8 | 1 | 251 | 3 | 861 | 942 | XP_004359899.1 Acyloxyacyl hydrolase [Cavenderia fasciculata] | diamond | 498 | 95.9 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Acytosteliales | Cavenderiaceae | Cavenderia | Cavenderia fasciculata | ||
| 27406863 | 27406863 | PRJNA1086823_P_NODE_15323_length_248_cov_0.891429_g15206_i0 | PRJNA1086823 | 15323 | 248 | 0.891429 | 2.21074392 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 86.3 | 7.68e-19 | NR | KYR01223.1 | 361077 | g15206 | i0 | 50 | 2.46774193548387 | 72 | 36 | 87.1 | 0 | 3 | 218 | 45 | 116 | KYR01223.1 GTP-binding protein Sar1A [Tieghemostelium lacteum] | diamond | 612 | 86.3 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Dictyosteliales | Raperosteliaceae | Tieghemostelium | Tieghemostelium lacteum | ||
| 27573035 | 27573035 | PRJNA1086823_P_NODE_8244_length_290_cov_1.313364_g8127_i0 | PRJNA1086823 | 8244 | 290 | 1.313364 | 3.8087556 | Pelomyxa schiedti | 1580589 | Evosea | other_Eukaryota | 99.4 | 1.02e-24 | NR | KAH3756107.1 | 1580589 | g8127 | i0 | 52.6 | 0.786206896551724 | 76 | 36 | 78.6 | 0 | 45 | 272 | 19 | 94 | KAH3756107.1 hypothetical protein Pelo_12095 [Pelomyxa schiedti] | diamond | 228 | 99.4 | 1 | Eukaryota | Amoebozoa | Evosea | Pelobiontida | Pelomyxidae | Pelomyxa | Pelomyxa schiedti | |||
| 28267474 | 28267474 | PRJNA1086823_P_NODE_1306_length_655_cov_1.594502_g1193_i0 | PRJNA1086823 | 1306 | 655 | 1.594502 | 10.4439881 | Acanthamoeba castellanii str. Neff | 1257118 | Discosea | other_Eukaryota | 303 | 1.3899999999999998e-99 | NR | XP_004353078.1 | 1257118 | g1193 | i0 | 68.2 | 2.97709923664122 | 217 | 68 | 99.4 | 1 | 3 | 653 | 136 | 351 | XP_004353078.1 meiotic recombinase Dmc1, putative [Acanthamoeba castellanii str. Neff] | diamond | 1950 | 303 | 1 | Eukaryota | Amoebozoa | Discosea | Longamoebia | Acanthamoebidae | Acanthamoeba | Acanthamoeba castellanii | |||
| 30920777 | 30920777 | PRJNA1086823_P_NODE_12354_length_253_cov_0.866667_g12237_i0 | PRJNA1086823 | 12354 | 253 | 0.866667 | 2.19266751 | Cavenderia fasciculata | 261658 | Evosea | other_Eukaryota | 102 | 7.85e-24 | NR | XP_004350112.1 | 261658 | g12237 | i0 | 61.9 | 0.99604743083004 | 84 | 31 | 99.6 | 1 | 1 | 252 | 176 | 258 | XP_004350112.1 severin [Cavenderia fasciculata] | diamond | 252 | 102 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Acytosteliales | Cavenderiaceae | Cavenderia | Cavenderia fasciculata |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;