contig_metadata
9 rows where bioproject = "PRJNA1085664" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 193566 | 193566 | PRJNA1085664_S_NODE_30581_length_161_cov_0.932203_g30162_i0 | PRJNA1085664 | 30581 | 161 | 0.932203 | 1.50084683 | Corynebacterium kroppenstedtii | 161879 | Bacteria | Bacteria | 292 | 7.24e-75 | NTclustered | gi|2809007534|gb|CP119163.1| | 2736648 | g30162 | i0 | 99.379 | 383.645962732919 | 161 | 1 | 100 | 0 | 1 | 161 | 186261 | 186421 | Corynebacterium kroppenstedtii subsp. demodicis strain Df-1 chromosome, complete genome | blastn | 61767 | 292 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium kroppenstedtii | ||
| 13770708 | 13770708 | PRJNA1085664_S_NODE_34551_length_153_cov_0.872727_g34132_i0 | PRJNA1085664 | 34551 | 153 | 0.872727 | 1.33527231 | Micrococcus | 1269 | Bacteria | Bacteria | 283 | 4.0799999999999995e-72 | NTclustered | gi|1891023613|gb|CP058971.1| | 1270 | g34132 | i0 | 100 | 308.986928104575 | 153 | 0 | 100 | 0 | 1 | 153 | 347932 | 348084 | Micrococcus luteus strain V017 chromosome, complete genome | blastn | 47275 | 283 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus luteus | ||
| 17595126 | 17595126 | PRJNA1085664_S_NODE_2654_length_492_cov_4.403118_g2253_i0 | PRJNA1085664 | 2654 | 492 | 4.403118 | 21.66334056 | Cutibacterium | 1912216 | Bacteria | Bacteria | 909 | 0 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g2253 | i0 | 100 | 314.227642276423 | 492 | 0 | 100 | 0 | 1 | 492 | 56747 | 57238 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 154600 | 909 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 23969743 | 23969743 | PRJNA1085664_S_NODE_25539_length_175_cov_0.939394_g25120_i0 | PRJNA1085664 | 25539 | 175 | 0.939394 | 1.6439395 | Corynebacterium | 1716 | Bacteria | Bacteria | 276 | 8.04e-70 | NTclustered | gi|470484386|ref|NR_076645.1| | 161879 | g25120 | i0 | 94.944 | 389.417142857143 | 178 | 6 | 100 | 1 | 1 | 175 | 470 | 647 | Corynebacterium kroppenstedtii strain DSM 44385 23S ribosomal RNA gene, complete sequence | blastn | 68148 | 276 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium kroppenstedtii | ||
| 25243689 | 25243689 | PRJNA1085664_S_NODE_3900_length_418_cov_2.600000_g3482_i0 | PRJNA1085664 | 3900 | 418 | 2.6 | 10.868 | Cutibacterium | 1912216 | Bacteria | Bacteria | 773 | 0 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g3482 | i0 | 100 | 265.349282296651 | 418 | 0 | 100 | 0 | 1 | 418 | 55448 | 55865 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 110916 | 773 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 27162089 | 27162089 | PRJNA1085664_S_NODE_32362_length_157_cov_1.026316_g31943_i0 | PRJNA1085664 | 32362 | 157 | 1.026316 | 1.61131612 | Cutibacterium acnes | 1747 | Bacteria | Bacteria | 60.8 | 4.04e-9 | NR | MES6284439.1 | 1747 | g31943 | i0 | 62 | 1.8343949044586 | 50 | 19 | 95.5 | 0 | 6 | 155 | 109 | 158 | MES6284439.1 hypothetical protein [Cutibacterium acnes] | diamond | 288 | 60.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 27794193 | 27794193 | PRJNA1085664_S_NODE_9304_length_284_cov_2.564315_g8885_i0 | PRJNA1085664 | 9304 | 284 | 2.564315 | 7.2826546 | Streptomyces sp. NPDC | 1931 | Bacteria | Bacteria | 42.7 | 0.0425 | NR | WP_366067297.1 | 3155153 | g8885 | i0 | 38.9 | 0.76056338028169 | 72 | 43 | 75 | 1 | 37 | 249 | 15 | 86 | WP_366067297.1 hypothetical protein [Streptomyces sp. NPDC049577] | diamond | 216 | 42.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. NPDC049577 | ||
| 28994150 | 28994150 | PRJNA1085664_S_NODE_16768_length_212_cov_2.272189_g16349_i0 | PRJNA1085664 | 16768 | 212 | 2.272189 | 4.81704068 | Micromonospora sp. NPDC | 1876 | Bacteria | Bacteria | 42.7 | 0.0246 | NR | WP_393523195.1 | 3364269 | g16349 | i0 | 41.2 | 0.721698113207547 | 51 | 29 | 72.2 | 1 | 158 | 6 | 227 | 276 | WP_393523195.1 aspartate aminotransferase family protein [Micromonospora sp. NPDC049282] | diamond | 153 | 42.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micromonosporales | Micromonosporaceae | Micromonospora | Micromonospora sp. NPDC049282 | ||
| 31647581 | 31647581 | PRJNA1085664_S_NODE_19457_length_198_cov_0.870968_g19038_i0 | PRJNA1085664 | 19457 | 198 | 0.870968 | 1.72451664 | Actinomycetota bacterium | 2900548 | Bacteria | Bacteria | 42.4 | 0.0232 | NR | MEA2843586.1 | 2900548 | g19038 | i0 | 48.6 | 0.560606060606061 | 37 | 19 | 56.1 | 0 | 24 | 134 | 61 | 97 | MEA2843586.1 purine-nucleoside/S-methyl-5-thioadenosine phosphorylase / adenosine deaminase [Actinomycetota bacterium] | diamond | 111 | 42.4 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;