RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA1082072" and tax_phylum = "Elusimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Elusimicrobiota · 8 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1082072 · 8 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20594219 20594219 PRJNA1082072_P_NODE_1477_length_287_cov_1.556075_g1470_i0 PRJNA1082072 1477 287 1.556075 4.46593525 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 167 1.12e-47   NR MFI5345421.1 2030800 g1470 i0 92.6 1.98606271777003 95 7 99.3 0 285 1 85 179 MFI5345421.1 glutamate-1-semialdehyde 2,1-aminomutase [Elusimicrobiota bacterium] diamond 570 167 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
27320447 27320447 PRJNA1082072_P_NODE_2063_length_251_cov_0.865169_g2056_i0 PRJNA1082072 2063 251 0.865169 2.17157419 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 100 1.17e-22   NR HEX4048888.1 2030800 g2056 i0 66.7 2.0199203187251 84 24 99.2 2 3 251 367 447 HEX4048888.1 serine/threonine-protein kinase [Elusimicrobiota bacterium] diamond 507 100 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
28994139 28994139 PRJNA1082072_P_NODE_2008_length_253_cov_1.711111_g2001_i0 PRJNA1082072 2008 253 1.711111 4.32911083 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 129 2.44e-36   NR HXT00855.1 2030800 g2001 i0 79.3 1.94466403162055 82 17 97.2 0 6 251 37 118 HXT00855.1 response regulator [Elusimicrobiota bacterium] diamond 492 129 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
29593359 29593359 PRJNA1082072_P_NODE_1950_length_258_cov_1.664865_g1943_i0 PRJNA1082072 1950 258 1.664865 4.2953517 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 96.3 5.3100000000000005e-21   NR MDE2510253.1 2030800 g1943 i0 91.1 1.33720930232558 56 5 65.1 0 2 169 438 493 MDE2510253.1 Flp pilus assembly complex ATPase component TadA [Elusimicrobiota bacterium] diamond 345 96.3 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
30352396 30352396 PRJNA1082072_P_NODE_1352_length_298_cov_1.368889_g1345_i0 PRJNA1082072 1352 298 1.368889 4.07928922 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 181 9.41e-53   NR MBI3563772.1 2030800 g1345 i0 84.4 0.966442953020134 96 15 96.6 0 2 289 23 118 MBI3563772.1 DUF4178 domain-containing protein [Elusimicrobiota bacterium] diamond 288 181 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
30889009 30889009 PRJNA1082072_P_NODE_2014_length_253_cov_1.322222_g2007_i0 PRJNA1082072 2014 253 1.322222 3.34522166 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 159 9.6e-45   NR MBI5629378.1 2030800 g2007 i0 91.7 0.99604743083004 84 7 99.6 0 252 1 259 342 MBI5629378.1 efflux RND transporter periplasmic adaptor subunit [Elusimicrobiota bacterium] diamond 252 159 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
30920767 30920767 PRJNA1082072_P_NODE_2894_length_242_cov_0.911243_g2887_i0 PRJNA1082072 2894 242 0.911243 2.20520806 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 111 1.7600000000000002e-26   NR MCR4295978.1 2030800 g2887 i0 65 1.94628099173554 80 28 99.2 0 240 1 310 389 MCR4295978.1 hypothetical protein [Elusimicrobiota bacterium] diamond 471 111 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
31204484 31204484 PRJNA1082072_P_NODE_2255_length_249_cov_0.875000_g2248_i0 PRJNA1082072 2255 249 0.875 2.17875 Elusimicrobia bacterium GWA2_66_18 1797926 Bacteria Bacteria 73.9 1.87e-13   NR OGR46552.1 1797926 g2248 i0 61.8 0.662650602409639 55 20 65.1 1 5 166 233 287 OGR46552.1 MAG: hypothetical protein A2X37_08760 [Elusimicrobia bacterium GWA2_66_18] diamond 165 73.9 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobia bacterium GWA2_66_18

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;