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contig_metadata

20 rows where bioproject = "PRJNA1082072" and tax_phylum = "Chlorophyta"

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tax_superkingdom 1

tax_phylum 1

  • Chlorophyta · 20 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1082072 · 20 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6571081 6571081 PRJNA1082072_P_NODE_1206_length_315_cov_1.673554_g1199_i0 PRJNA1082072 1206 315 1.673554 5.2716951 Chlorophyta 3041 Plants Plants 115 1.5399999999999998e-30   NR CAD7703134.1 121088 g1199 i0 77.5 3.38095238095238 71 16 67.6 0 313 101 21 91 CAD7703134.1 unnamed protein product [Ostreobium quekettii] diamond 1065 115 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Ostreobiaceae Ostreobium Ostreobium quekettii
11671863 11671863 PRJNA1082072_P_NODE_1050_length_336_cov_1.171103_g1043_i0 PRJNA1082072 1050 336 1.171103 3.93490608 Trebouxia sp. A1-2 2608996 Plants Plants 85.9 5.36e-17   NR KAA6425335.1 2608996 g1043 i0 68.9 1.47321428571429 61 19 54.5 0 3 185 283 343 KAA6425335.1 MAG: 60S ribosomal L4-like [Trebouxia sp. A1-2] diamond 495 85.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. A1-2
12946913 12946913 PRJNA1082072_P_NODE_1811_length_268_cov_1.384615_g1804_i0 PRJNA1082072 1811 268 1.384615 3.7107682 Trebouxiales 2507901 Plants Plants 140 3.65e-37   NR BDA47919.1 2315456 g1804 i0 80.9 34.8694029850746 89 17 99.6 0 2 268 389 477 BDA47919.1 V-type proton ATPase subunit B 1 [Coccomyxa sp. Obi] diamond 9345 141 0.99290780141844 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa sp. Obi
16319707 16319707 PRJNA1082072_P_NODE_753_length_376_cov_2.363036_g746_i0 PRJNA1082072 753 376 2.363036 8.88501536 Eukaryota 2759 Plants Plants 145 3.25e-39   NR KXZ43232.1 33097 g746 i0 77.5 10.0132978723404 89 20 71 0 268 2 249 337 KXZ43232.1 hypothetical protein GPECTOR_97g770 [Gonium pectorale] diamond 3765 145 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Gonium Gonium pectorale
20594225 20594225 PRJNA1082072_P_NODE_2477_length_247_cov_0.885057_g2470_i0 PRJNA1082072 2477 247 0.885057 2.18609079 Auxenochlorella protothecoides 3075 Plants Plants 87.8 3.33e-18   NR RMZ52209.1 3075 g2470 i0 69.7 4.82186234817814 66 19 80.2 1 206 9 5 69 RMZ52209.1 hypothetical protein APUTEX25_001599 [Auxenochlorella protothecoides] diamond 1191 87.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
26774229 26774229 PRJNA1082072_P_NODE_1561_length_282_cov_1.473684_g1554_i0 PRJNA1082072 1561 282 1.473684 4.15578888 root 1 Root_unresolved Root_unresolved 48.5 5.63e-4   NR XP_001415544.1 436017 g1554 i0 39.8 3.58510638297872 88 44 86.2 3 17 259 248 333 XP_001415544.1 predicted protein [Ostreococcus lucimarinus CCE9901] diamond 1011 48.9 0.991820040899796 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Bathycoccaceae Ostreococcus Ostreococcus sp. 'lucimarinus'
27288724 27288724 PRJNA1082072_P_NODE_2783_length_243_cov_0.905882_g2776_i0 PRJNA1082072 2783 243 0.905882 2.20129326 Pleodorina starrii 330485 Plants Plants 50.4 7.11e-5   NR GLC43323.1 330485 g2776 i0 52 0.617283950617284 50 23 60.5 1 2 148 37 86 GLC43323.1 hypothetical protein PLESTM_001458600 [Pleodorina starrii] diamond 150 50.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Pleodorina Pleodorina starrii
27509986 27509986 PRJNA1082072_P_NODE_2923_length_241_cov_0.916667_g2916_i0 PRJNA1082072 2923 241 0.916667 2.20916747 Edaphochlamys debaryana 47281 Plants Plants 44.7 0.00793   NR KAG2482319.1 47281 g2916 i0 44.9 0.609958506224066 49 22 54.8 1 7 138 1043 1091 KAG2482319.1 hypothetical protein HYH03_018741 [Edaphochlamys debaryana] diamond 147 44.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales   Edaphochlamys Edaphochlamys debaryana
28322193 28322193 PRJNA1082072_P_NODE_1506_length_286_cov_1.112676_g1499_i0 PRJNA1082072 1506 286 1.112676 3.18225336 root 1 Root_unresolved Root_unresolved 122 8.57e-30   NR WPT12942.1 1470871 g1499 i0 63.2 6.78671328671329 95 34 98.6 1 3 284 871 965 WPT12942.1 Chaperonin CPN60-2 [Picochlorum sp. SENEW3] diamond 1941 122 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae     Picochlorum Picochlorum sp. SENEW3
28511654 28511654 PRJNA1082072_P_NODE_847_length_362_cov_2.131488_g840_i0 PRJNA1082072 847 362 2.131488 7.71598656 Eukaryota 2759 Plants Plants 47.8 0.00149   NR WIA28476.1 3088 g840 i0 45.5 0.73756906077348094 44 24 36.5 0 341 210 2 45 WIA28476.1 hypothetical protein OEZ86_011020 [Tetradesmus obliquus] diamond 267 48.1 0.993762993762994 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
29017204 29017204 PRJNA1082072_P_NODE_1508_length_286_cov_1.084507_g1501_i0 PRJNA1082072 1508 286 1.084507 3.10169002 Viridiplantae 33090 Plants Plants 73.6 9.19e-13   NR KAK3236683.1 36881 g1501 i0 41.4 2.05594405594406 99 54 99.7 3 1 285 385 483 KAK3236683.1 hypothetical protein CYMTET_53189 [Cymbomonas tetramitiformis] diamond 588 74.3 0.990578734858681 Eukaryota   Viridiplantae Chlorophyta Pyramimonadophyceae Pyramimonadales Pyramimonadaceae Cymbomonas Cymbomonas tetramitiformis
29688159 29688159 PRJNA1082072_P_NODE_1090_length_331_cov_1.534884_g1083_i0 PRJNA1082072 1090 331 1.534884 5.08046604 Chlamydomonas eustigma 1157962 Plants Plants 157 5.74e-46   NR GAX77325.1 1157962 g1083 i0 70.9 0.996978851963746 110 32 99.7 0 330 1 87 196 GAX77325.1 hypothetical protein CEUSTIGMA_g4771.t1 [Chlamydomonas eustigma] diamond 330 157 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
29742842 29742842 PRJNA1082072_P_NODE_1730_length_273_cov_1.540000_g1723_i0 PRJNA1082072 1730 273 1.54 4.2042 Trebouxia 13786 Plants Plants 73.6 4.29e-14   NR KAA6427975.1 2608996 g1723 i0 39.5 1.81318681318681 81 49 89 0 22 264 6 86 KAA6427975.1 MAG: Calcium-dependent kinase 23 isoform 1 [Trebouxia sp. A1-2] diamond 495 73.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. A1-2
30004407 30004407 PRJNA1082072_P_NODE_2091_length_251_cov_0.865169_g2084_i0 PRJNA1082072 2091 251 0.865169 2.17157419 Scenedesmus sp. PABB 2909984 Plants Plants 47.8 7.2e-4   NR KAF8065954.1 2742167 g2084 i0 35 0.717131474103586 60 39 71.7 0 240 61 606 665 KAF8065954.1 Slc25a24 [Scenedesmus sp. PABB004] diamond 180 47.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. PABB004
30975317 30975317 PRJNA1082072_P_NODE_2914_length_241_cov_0.916667_g2907_i0 PRJNA1082072 2914 241 0.916667 2.20916747 Chlorellaceae 35461 Plants Plants 128 2.38e-36   NR PRW20625.1 3076 g2907 i0 77.5 9.95850622406639 80 18 99.6 0 241 2 5 84 PRW20625.1 60S ribosomal L30 [Chlorella sorokiniana] diamond 2400 128 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
31711035 31711035 PRJNA1082072_P_NODE_1017_length_339_cov_1.157895_g1010_i0 PRJNA1082072 1017 339 1.157895 3.92526405 Coccomyxa subellipsoidea C-169 574566 Plants Plants 154 2.1799999999999994e-42   NR XP_005645852.1 574566 g1010 i0 61.9 1 113 43 100 0 339 1 5 117 XP_005645852.1 glutathione S-transferase [Coccomyxa subellipsoidea C-169] diamond 339 154 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
32217279 32217279 PRJNA1082072_P_NODE_2478_length_247_cov_0.885057_g2471_i0 PRJNA1082072 2478 247 0.885057 2.18609079 Coccomyxa viridis 1274662 Plants Plants 79 3.48e-15   NR CAL5218460.1 1274662 g2471 i0 55.8 3.74089068825911 77 33 93.5 1 2 232 79 154 CAL5218460.1 g141 [Coccomyxa viridis] diamond 924 79 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
32280715 32280715 PRJNA1082072_P_NODE_1239_length_311_cov_0.970588_g1232_i0 PRJNA1082072 1239 311 0.970588 3.01852868 Coccomyxa subellipsoidea C-169 574566 Plants Plants 133 1.1599999999999999e-34   NR XP_005645852.1 574566 g1232 i0 59.2 0.993569131832797 103 42 99.4 0 3 311 53 155 XP_005645852.1 glutathione S-transferase [Coccomyxa subellipsoidea C-169] diamond 309 133 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
32682475 32682475 PRJNA1082072_P_NODE_2380_length_248_cov_0.880000_g2373_i0 PRJNA1082072 2380 248 0.88 2.1824 Eukaryota 2759 Plants Plants 43.9 0.0159   NR PRW56522.1 3076 g2373 i0 35.7 3.01209677419355 70 36 84.7 3 11 220 960 1020 PRW56522.1 ABC transporter F family member 4 isoform A [Chlorella sorokiniana] diamond 747 43.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
32691059 32691059 PRJNA1082072_P_NODE_1900_length_262_cov_1.629630_g1893_i0 PRJNA1082072 1900 262 1.62963 4.2696306 Picochlorum sp. BPE23 2696299 Plants Plants 114 1.1000000000000001e-30   NR KAI8107378.1 2696299 g1893 i0 59.5 1.90076335877863 84 34 96.2 0 257 6 9 92 KAI8107378.1 hypothetical protein M9435_002409 [Picochlorum sp. BPE23] diamond 498 114 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae     Picochlorum Picochlorum sp. BPE23

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;