RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1082072", tax_phylum = "Candidatus Melainabacteria" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 4 ✖

tax_phylum 1

  • Candidatus Melainabacteria · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1082072 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28204297 28204297 PRJNA1082072_P_NODE_2346_length_248_cov_0.880000_g2339_i0 PRJNA1082072 2346 248 0.88 2.1824 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 140 9.05e-39   NR MDR3617262.1 2364082 g2339 i0 90.2 0.991935483870968 82 8 99.2 0 3 248 122 203 MDR3617262.1 ABC transporter permease [Candidatus Obscuribacterales bacterium] diamond 246 140 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
30193759 30193759 PRJNA1082072_P_NODE_2832_length_242_cov_0.911243_g2825_i0 PRJNA1082072 2832 242 0.911243 2.20520806 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 117 1.61e-29   NR MDR3616527.1 2364082 g2825 i0 67.6 0.91735537190082606 74 24 91.7 0 1 222 283 356 MDR3616527.1 hypothetical protein [Candidatus Obscuribacterales bacterium] diamond 222 117 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
31006797 31006797 PRJNA1082072_P_NODE_2294_length_249_cov_0.875000_g2287_i0 PRJNA1082072 2294 249 0.875 2.17875 Bacillati 1783272 Bacteria Bacteria 114 3.4900000000000006e-27   NR PZM85469.1 2052166 g2287 i0 63.3 2.90361445783133 79 29 95.2 0 239 3 323 401 PZM85469.1 MAG: S9 family peptidase [Candidatus Melainabacteria bacterium] diamond 723 114 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
31742515 31742515 PRJNA1082072_P_NODE_2457_length_247_cov_0.885057_g2450_i0 PRJNA1082072 2457 247 0.885057 2.18609079 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 147 6.2899999999999986e-40   NR MBI2811385.1 2052166 g2450 i0 95.1 0.983805668016194 81 4 98.4 0 245 3 182 262 MBI2811385.1 TolC family protein [Candidatus Melainabacteria bacterium] diamond 243 147 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;