contig_metadata
8 rows where bioproject = "PRJNA1082072", tax_phylum = "Bacillota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2292519 | 2292519 | PRJNA1082072_P_NODE_1042_length_337_cov_1.166667_g1035_i0 | PRJNA1082072 | 1042 | 337 | 1.166667 | 3.93166779 | Staphylococcus | 1279 | Bacteria | Bacteria | 623 | 5.369999999999999e-174 | NTclustered | gi|443907020|gb|KC329827.1| | 1282 | g1035 | i0 | 100 | 163.967359050445 | 337 | 0 | 100 | 0 | 1 | 337 | 475 | 139 | Staphylococcus epidermidis strain 14F 16S ribosomal RNA gene, partial sequence | blastn | 55257 | 623 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 25243512 | 25243512 | PRJNA1082072_P_NODE_900_length_354_cov_1.096085_g893_i0 | PRJNA1082072 | 900 | 354 | 1.096085 | 3.8801409 | Staphylococcus | 1279 | Bacteria | Bacteria | 189 | 2.45e-43 | NTclustered | gi|2894814215|gb|CP178526.1| | 1292 | g893 | i0 | 79.286 | 79.0423728813559 | 280 | 50 | 78 | 7 | 70 | 345 | 1073843 | 1074118 | Staphylococcus warneri strain X5R13 chromosome, complete genome | blastn | 27981 | 189 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus warneri | ||
| 26846254 | 26846254 | PRJNA1082072_P_NODE_1921_length_260_cov_1.647059_g1914_i0 | PRJNA1082072 | 1921 | 260 | 1.647059 | 4.2823534 | Clostridium perfringens | 1502 | Bacteria | Bacteria | 65.9 | 1.1e-11 | NR | WP_395252126.1 | 1502 | g1914 | i0 | 88.9 | 0.415384615384615 | 36 | 4 | 41.5 | 0 | 153 | 260 | 1 | 36 | WP_395252126.1 hypothetical protein, partial [Clostridium perfringens] | diamond | 108 | 65.9 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium perfringens | ||
| 28393870 | 28393870 | PRJNA1082072_P_NODE_2266_length_249_cov_0.875000_g2259_i0 | PRJNA1082072 | 2266 | 249 | 0.875 | 2.17875 | Gemmiger sp. An5 | 2049027 | Bacteria | Bacteria | 68.2 | 4.4e-11 | NR | WP_087182640.1 | 1965639 | g2259 | i0 | 64.2 | 2.46987951807229 | 53 | 19 | 63.9 | 0 | 161 | 3 | 599 | 651 | WP_087182640.1 glycoside hydrolase family 3 C-terminal domain-containing protein [Gemmiger sp. An50] | diamond | 615 | 68.2 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Gemmiger | Gemmiger sp. An50 | |||
| 31132898 | 31132898 | PRJNA1082072_P_NODE_2115_length_251_cov_0.865169_g2108_i0 | PRJNA1082072 | 2115 | 251 | 0.865169 | 2.17157419 | Bacillati | 1783272 | Bacteria | Bacteria | 120 | 1.86e-29 | NR | MCI6848192.1 | 2049044 | g2108 | i0 | 68.7 | 11.7370517928287 | 83 | 26 | 99.2 | 0 | 249 | 1 | 278 | 360 | MCI6848192.1 pyruvate, phosphate dikinase [Erysipelotrichaceae bacterium] | diamond | 2946 | 120 | 1 | Bacteria | Bacillati | Bacillota | Erysipelotrichia | Erysipelotrichales | Erysipelotrichaceae | Erysipelotrichaceae bacterium | |||
| 31268219 | 31268219 | PRJNA1082072_P_NODE_1755_length_272_cov_1.221106_g1748_i0 | PRJNA1082072 | 1755 | 272 | 1.221106 | 3.32140832 | Ruminiclostridium sp. | 2053608 | Bacteria | Bacteria | 43.1 | 0.0376 | NR | MBR5533222.1 | 2053608 | g1748 | i0 | 40.7 | 0.650735294117647 | 59 | 35 | 65.1 | 0 | 196 | 20 | 197 | 255 | MBR5533222.1 MATE family efflux transporter [Ruminiclostridium sp.] | diamond | 177 | 43.1 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Ruminiclostridium | Ruminiclostridium sp. | ||
| 31955385 | 31955385 | PRJNA1082072_P_NODE_2137_length_251_cov_0.865169_g2130_i0 | PRJNA1082072 | 2137 | 251 | 0.865169 | 2.17157419 | Bacilli | 91061 | Bacteria | Bacteria | 42.4 | 0.0463 | NR | CKF71294.1 | 1313 | g2130 | i0 | 34.8 | 1.42231075697211 | 69 | 35 | 70.5 | 2 | 75 | 251 | 20 | 88 | CKF71294.1 succinate-semialdehyde dehydrogenase [Streptococcus pneumoniae] | diamond | 357 | 42.7 | 0.992974238875878 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus pneumoniae | ||
| 32533818 | 32533818 | PRJNA1082072_P_NODE_2959_length_241_cov_0.916667_g2952_i0 | PRJNA1082072 | 2959 | 241 | 0.916667 | 2.20916747 | Lachnospiraceae bacterium | 1898203 | Bacteria | Bacteria | 44.3 | 0.0103 | NR | MCR4960309.1 | 1898203 | g2952 | i0 | 34.2 | 0.946058091286307 | 76 | 38 | 79.7 | 3 | 210 | 19 | 263 | 338 | MCR4960309.1 MBOAT family protein [Lachnospiraceae bacterium] | diamond | 228 | 44.3 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Lachnospiraceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;