RNAquarium Metadata Server
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contig_metadata

12 rows where bioproject = "PRJNA1082072", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 12 ✖

tax_phylum 1

  • Acidobacteriota · 12 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1082072 · 12 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20594220 20594220 PRJNA1082072_P_NODE_1697_length_275_cov_1.524752_g1690_i0 PRJNA1082072 1697 275 1.524752 4.193068 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 164 1.4200000000000001e-44   NR HSM79910.1 2212468 g1690 i0 86.8 0.992727272727273 91 12 99.3 0 3 275 482 572 HSM79910.1 bifunctional transaldolase/phosoglucose isomerase [Bryobacteraceae bacterium] diamond 273 164 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
26932415 26932415 PRJNA1082072_P_NODE_1622_length_279_cov_1.242718_g1615_i0 PRJNA1082072 1622 279 1.242718 3.46718322 Terriglobia 204432 Bacteria Bacteria 139 5.499999999999999e-38   NR MBZ5595859.1 2081523 g1615 i0 73.1 10 93 25 100 0 1 279 242 334 MBZ5595859.1 GRP family sugar transporter [Terriglobia bacterium] diamond 2790 140 0.992857142857143 Bacteria   Pseudomonadati Acidobacteriota Terriglobia       Terriglobia bacterium
27185226 27185226 PRJNA1082072_P_NODE_882_length_357_cov_1.084507_g875_i0 PRJNA1082072 882 357 1.084507 3.87168999 Pseudomonadati 3379134 Bacteria Bacteria 81.6 2e-15   NR HZI67882.1 2651171 g875 i0 42.2 4.73109243697479 109 56 89.9 4 324 4 245 348 HZI67882.1 M35 family metallo-endopeptidase [Thermoanaerobaculia bacterium] diamond 1689 81.6 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
27446976 27446976 PRJNA1082072_P_NODE_1443_length_289_cov_1.231481_g1436_i0 PRJNA1082072 1443 289 1.231481 3.55898009 Acidobacteriota bacterium 1978231 Bacteria Bacteria 63.5 2.41e-9   NR RMG02645.1 1978231 g1436 i0 44.3 0.913494809688581 88 37 86.2 3 3 251 175 255 RMG02645.1 MAG: hypothetical protein D6735_09940 [Acidobacteriota bacterium] diamond 264 63.5 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28583550 28583550 PRJNA1082072_P_NODE_1287_length_305_cov_1.327586_g1280_i0 PRJNA1082072 1287 305 1.327586 4.0491373 Terriglobales bacterium 2282142 Bacteria Bacteria 86.7 7.36e-20   NR HKS75843.1 2282142 g1280 i0 57.6 0.649180327868852 66 28 64.9 0 200 3 6 71 HKS75843.1 hypothetical protein [Terriglobales bacterium] diamond 198 86.7 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
28835934 28835934 PRJNA1082072_P_NODE_2788_length_243_cov_0.905882_g2781_i0 PRJNA1082072 2788 243 0.905882 2.20129326 Candidatus Angelobacter sp. 2976921 Bacteria Bacteria 107 6.53e-25   NR HET9366280.1 2976921 g2781 i0 71.4 3.80246913580247 77 22 95.1 0 2 232 1079 1155 HET9366280.1 amino acid adenylation domain-containing protein [Candidatus Angelobacter sp.] diamond 924 107 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia     Candidatus Angelobacter Candidatus Angelobacter sp.
31078706 31078706 PRJNA1082072_P_NODE_2615_length_245_cov_0.895349_g2608_i0 PRJNA1082072 2615 245 0.895349 2.19360505 Acidobacteriota bacterium 1978231 Bacteria Bacteria 59.3 5.67e-8   NR MEK6321658.1 1978231 g2608 i0 39.5 2.46122448979592 81 45 99.2 2 244 2 1777 1853 MEK6321658.1 HYR domain-containing protein [Acidobacteriota bacterium] diamond 603 59.3 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31828739 31828739 PRJNA1082072_P_NODE_2037_length_251_cov_1.977528_g2030_i0 PRJNA1082072 2037 251 1.977528 4.96359528 PVC group 1783257 Bacteria Bacteria 100 9.2e-23   NR OLC80423.1 1803456 g2030 i0 64.3 5.00796812749004 70 25 83.7 0 251 42 309 378 OLC80423.1 MAG: hypothetical protein AUH72_11670 [Acidobacteria bacterium 13_1_40CM_4_65_8] diamond 1257 101 0.99009900990099 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteria bacterium 13_1_40CM_4_65_8
31869078 31869078 PRJNA1082072_P_NODE_2797_length_243_cov_0.905882_g2790_i0 PRJNA1082072 2797 243 0.905882 2.20129326 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 62 6.07e-9   NR HWF11625.1 2212468 g2790 i0 47.4 3.76543209876543 78 39 93.8 1 16 243 49 126 HWF11625.1 ankyrin repeat domain-containing protein [Bryobacteraceae bacterium] diamond 915 62 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
32407123 32407123 PRJNA1082072_P_NODE_2199_length_250_cov_0.870056_g2192_i0 PRJNA1082072 2199 250 0.870056 2.17514 Candidatus Angelobacter sp. 2976921 Bacteria Bacteria 84 1.2e-16   NR HEY1525240.1 2976921 g2192 i0 50 6.9 82 41 98.4 0 4 249 270 351 HEY1525240.1 phosphoesterase [Candidatus Angelobacter sp.] diamond 1725 84 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia     Candidatus Angelobacter Candidatus Angelobacter sp.
32785529 32785529 PRJNA1082072_P_NODE_720_length_381_cov_2.000000_g713_i0 PRJNA1082072 720 381 2 7.62 Acidobacteriaceae bacterium 2052142 Bacteria Bacteria 85.5 7.65e-17   NR MDR3737318.1 2052142 g713 i0 45.5 0.866141732283465 110 53 82.7 3 25 339 200 307 MDR3737318.1 hypothetical protein [Acidobacteriaceae bacterium] diamond 330 85.5 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium
32817126 32817126 PRJNA1082072_P_NODE_1040_length_337_cov_1.549242_g1033_i0 PRJNA1082072 1040 337 1.549242 5.22094554 Acidobacteriaceae bacterium 2052142 Bacteria Bacteria 76.3 1.14e-13   NR MDR3737318.1 2052142 g1033 i0 41.7 0.961424332344214 108 60 93.5 2 1 315 205 312 MDR3737318.1 hypothetical protein [Acidobacteriaceae bacterium] diamond 324 76.3 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;