RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1082072" and tax_kingdom = "Thermotogati"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Thermotogati · 3 ✖

bioproject 1

  • PRJNA1082072 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3567847 3567847 PRJNA1082072_P_NODE_523_length_432_cov_1.646240_g516_i0 PRJNA1082072 523 432 1.64624 7.1117568 Deinococcus 1298 Bacteria Bacteria 523 7.349999999999998e-144   NTclustered gi|1761809830|gb|CP044990.1| 2652443 g516 i0 88.532 200.949074074074 436 44 100 5 1 432 97390 97823 Deinococcus sp. AJ005 chromosome, complete genome blastn 86810 523 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp. AJ005
14221921 14221921 PRJNA1082072_P_NODE_1192_length_316_cov_2.259259_g1185_i0 PRJNA1082072 1192 316 2.259259 7.13925844 Deinococcus puniceus 1182568 Bacteria Bacteria 534 2.4099999999999998e-147   NTclustered gi|1028459476|gb|CP011387.1| 1182568 g1185 i0 97.444 210.094936708861 313 8 99 0 1 313 70550 70862 Deinococcus puniceus strain DY1, complete genome blastn 66390 534 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus puniceus
32848591 32848591 PRJNA1082072_P_NODE_2520_length_246_cov_0.890173_g2513_i0 PRJNA1082072 2520 246 0.890173 2.18982558 Synergistaceae bacterium 2053624 Bacteria Bacteria 131 2.79e-33   NR MFA7219119.1 2053624 g2513 i0 72.2 4.84146341463415 79 22 96.3 0 238 2 563 641 MFA7219119.1 hypothetical protein [Synergistaceae bacterium] diamond 1191 131 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;